KEGG   Sorghum bicolor (sorghum): 8072925
Entry
8072925           CDS       T01086                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8072925
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     8072925
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 8072925
NCBI-ProteinID: XP_002438363
UniProt: C5Z2C6
LinkDB
Position
10:complement(22436943..22444094)
AA seq 643 aa
MAAAAAAAPESYIGSLISLMSKSEIRYEGVLYTINTEESSIGLRNVRSFGTEGRKKDGQQ
IPASDKIYEYILFRGSDIKDLQVKSSPPSQSATLHNDPAIIQSHYPHPASLSTSLPSAAS
TTTANPTSHNAPSMIQMPPPFQGNLPPYQSGTSLQSWNSSPMPSSANGTGLTMPPMYWPG
YYTPPTGFPHLQPPPFLRPPHSLAVPQALQLPIQYPGLGSLPTGFPSMPELPSFLQPGNS
NSLSQTSGVPTSVSVPASLSTSETESSRSQLPNKWSSDSASVVSVSFAPPSVTPSVSTDE
PSMPVSQVLPSLVNSKPVALPDSTVPSLSTDKPVIVLDASVPTYLSSSQPPSANDASPVN
VAEQVPLVTPGQLLATTSSTIVSSHALQTSAVVPSSKAVPSSVPSSQATLSVASPTQVAS
SSVLSQQVEVTSESKPAKQREWKAKQPVVATPGNKKALLPAPKPVLQKPVGVSSYVQYNN
RGRGRGRGHGRGNGQSHPITKFTEDFDFMAMNEKFNKDEVWGHLGKSIGQLNDEPNGYGD
VLEDDEISPRKPEAMAVYVKDDFFDSLSCNTIDNGGRNGRVKFSEQRKIDTETFGDSARH
RPTGIRGRAPRGGGGGPRGRGYYGRGYGYMGRGRGYSYPNHQS
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggcggcggcggcagctgcagcgccggagtcgtacatcgggagcctgataagcctcatg
tccaagagcgagatccggtacgagggagtcctgtacaccatcaacaccgaggagtccagc
atcgggctcagaaacgttcgctcatttggaactgaaggtcgtaagaaggatggccaacag
attcctgccagcgacaagatatatgagtacatactctttcgaggaagtgatataaaggat
ttgcaagtcaaatcctctccaccatctcagtcagcaactttacacaatgatcctgctatt
attcagtcacattatcctcatccagcttcgttgtctacaagcttgccttctgctgcaagc
acaacaacagctaatcctacttcacacaatgctccatccatgattcagatgccaccacca
tttcaagggaatttgcccccttaccaatctggcaccagcttacagtcatggaactcgtca
cctatgccatcatcagcgaatggcactggccttacaatgccaccaatgtactggccagga
tattacacaccaccaactgggtttcctcatctgcagccgccaccctttcttaggccacca
cacagtttggctgttccacaggccctgcagcttcctatacaatatcctggacttggatct
ttacccactggatttccaagtatgccagagcttccttcttttcttcaacctggtaatagt
aatagtttaagtcaaacttcaggtgtacctacatctgtgtcagtacctgcttcattgagt
acatcagaaactgaatcatcaagaagccaactgccaaataagtggtcatctgattctgct
tctgtagtatctgtgagttttgctcctccatctgtgactccttcagtttcgacagatgaa
ccctccatgcccgtgtcacaagtattgccttctctggtgaacagtaaaccagtagctctt
cctgactctactgtgccctctctctccactgataagcctgtgattgtacttgatgcttca
gtgccaacctatctatcatcgtctcagccaccatctgctaatgatgcatctccagtcaat
gttgcagagcaagttccattggtaactcctgggcaacttctggcaactacttcctctaca
attgtatcatctcatgccttgcaaacttctgctgtggttccatcctctaaggctgtcccc
tcttcagttccatcctctcaggctacattgtctgttgcttcacccacacaggttgcttcc
tcttctgttttgtcgcaacaggtggaagtgaccagtgaaagtaagccagccaagcagcgt
gagtggaaggcaaaacaacctgtggttgctacacctggaaataagaaggccctattgcct
gcgcccaagcccgtgcttcaaaagcctgtaggagtttcctcgtatgtccagtacaacaat
agaggccggggaagaggaagaggccacggaagaggaaatgggcaatcacatcccataacc
aagttcacagaggacttcgatttcatggcaatgaatgagaagttcaacaaagatgaagta
tggggccatcttggtaaaagcatagggcagttaaatgatgaaccaaatggttatggagat
gttctagaagacgatgagatatcacctagaaagccagaagctatggctgtgtatgttaaa
gatgacttctttgattcactctcttgcaacacaattgacaatggagggagaaatggaaga
gtgaaattctctgagcagaggaaaatagacaccgagacctttggtgactcagcaaggcat
cgaccaacgggcatccgaggtagggccccgcgtggtgggggtggtggccctcgtggtcgt
ggctattatggtagaggatatggatatatgggtaggggccgtggctactcttacccaaat
caccagtcgtga

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