Sorghum bicolor (sorghum): 8073110
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Entry
8073110 CDS
T01086
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8073110
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
8073110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
8073110
NCBI-ProteinID:
XP_002461127
LinkDB
All DBs
Position
2:74915198..74926596
Genome browser
AA seq
1769 aa
AA seq
DB search
MAASGFGREAGPSARGPGSALPAFGVGAATPTGTTPSPAIPSFPSARPATPSFPSARPVT
PSFPSARPANSSFPSARPSNPSFPSARPSNPSLPSVRPAAPSFPSPRPQLATADTTSRSA
ATRSMPVPVPSTRPTAGTSLRFPSSRPALDPGATAATSRHVARHLQPQPRPAIPSVSRSA
DPLISSRNRALSPVSNLRADSPADYNNGMEQRRLVTYVDPLFENGSLQSSEQLRMRPSEN
MRSQTSAGSPPSNIASKFRPPSDFQDHHHVQIVDPRANVYNRFTGSMQNRSLDHNISKRS
RSPTLSYQDADGTEAHTNTGGNSRRLVDYSDTISDENVEASKRMRSPASEFTRMVKSPPS
DIRDNIRSSPVDFGNSNSAQNLHAHADVQRSDASSPKSGNQIQSRIGGARSPPQQMSRLS
GSNELNTLAISPPKPSILSATRRTGISPLDATDDDHLTPSTEFEREEQAKAKRLARFHVE
LSRPVENTNDFVKALKSSADKSKQATSVGKTPMRTNDDTDESTLADMDSTSLAAIVGLCP
DMCPEPERAERERKGDLDRYERLHGDRNLTTELLAVKKYNRTAERDADLIRPLPVLQKTM
EYLLGLLDHTYDDSFLGLYNFLWDRMRAIRMDLRMQHFFNQEAISMLEQMIRLHIIAMHE
LCEYNKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRREGVFFSTEKEFRGYYALLKLD
KHPGYKVEPAELSLDLAKMSREIRGSPEILFAREVARACRMGNFISFFRLARKATYLQAC
LMHAHFAKLRRQALASLHSGLQNGQGIPISQVVEWLGMEDEDVESLLEYHGFGLRQYEEL
YLVKEGPFLNSESDFPSGCSQLVHSKKSQRVVDDVSSGPVCAPIGKEKTVFPYPGQLAAG
KRDLFLPQNAPGIPPDGRRDLDPSFPGPVSTTPDRQISSLFSGPFSPKAANKLFSSTHPK
PLSPTDARKDGFSSFPTAASPRTGKRDIFSKTPKVASPKTEGKTKLANDLIAEGRDSGVA
EVPQKVEMQTDLLWSQANTQHVNALAEPIVSHSLADSISLEYSNMYGPEDDFRAHVSGIG
TDMDEGTPPDHEVLVEPGSPISSPLPDHEEYEDHSISNSANDDWLPIVTSTKKLISDENL
KAILRKWRQRAADKRLIREQKNALAVAALCSLSLGPPVHKNTMVPKLAVEELDIGHAFKE
RQARKQRSWSRLNVSELSGPIINENNPDARCLCWKLLVLVPPGAMESQTNSYASKWLLRK
LMGYGIGESGLVVSSAGLSIWTEWISFPNACCLSVVRTSDQQVIDNDTANSTSSVVFVVS
ESISWEMQKERFNSLLAYIPDGSNLPLLILSGDTYNEGYDYASKYIIDRLGLSGLIGGKI
GSSLVIFLVENYTEDHANGFFDDDKLREGLKWLISSLARQPDVTFVKTHELLLDFLNPQL
ELLNTHVAPGAGPGDCISVFNNAVNQLAEEILAAARANSSQWPPPEIDLLERTSNERIYA
EMFLPSIGWSSPSRIQPLLAAINSCKIPDFSYDLSWLNHGSHMGQQIQDQKLLLQECLAR
YLTESVRLLDETQVVTEVDIMVQKCVGLELRDSSYYLAPRWVAIFRRIYNWRLAKLSTGE
FSEAYVLTQHLYQSPAAAGSNGTTQGLTANNTTRDDVAILEDHIMMPAVSTGISLDEIIE
ISCDLDAVDAQPVTPLPPRLPAQVHEEPQAPTDTNDMANGAHGVDEMHIPRRVELGELVP
LERDDKLARLLEQCTKLQDRIDETLSIYF
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatccggattcggccgcgaagccgggccctccgcccgcggccctggctccgcc
ttacccgctttcggagtcggcgccgccaccccaaccggcaccaccccatctccggctatc
ccgtccttcccttccgctcgccctgcgaccccatcctttccctccgctcgcccggttacc
ccgtccttcccctccgctcgccccgccaactcgtccttcccctccgctcgccccagcaac
ccgtccttcccttcagctcgccccagcaacccgtccctcccctctgtgcgcccggccgcc
ccgagcttcccgagcccccgccctcagctcgccacggcggatacaacctctcgctctgct
gccactcggtccatgcctgtacctgtaccctccacacgtccaactgctggcacttcactg
cgcttccctagctctcgtcctgcactcgatccaggtgcgaccgctgccaccagtcgccac
gttgctcggcatcttcagccccagccgaggccagccataccatcagtaagcaggtctgca
gatcctcttatttcctcaaggaacagggccctatcacctgtatcaaatctgcgtgcagat
tctccagcagattacaataatggtatggaacaaagaaggttggtgacctatgtagaccca
ttgtttgaaaatggaagtttgcaatcttcagagcaattgaggatgcgaccttcagagaac
atgaggtcacaaacttcagccggatcaccgccatcaaacatagccagcaagtttagacct
ccatcagacttccaagatcatcatcatgtgcagattgttgatcctcgtgctaatgtgtat
aatagattcactggttcaatgcaaaatcgatcgttggaccataacatttcaaaaaggtca
aggtcacctactttgtcctatcaggatgctgatggcacagaagctcatactaatactggt
ggaaattctaggagactggttgactattcggataccatcagtgatgaaaatgttgaagcc
tcaaaaaggatgcgatcacctgcatcagagttcacacgcatggtcaagtcaccaccatca
gatatcagagacaatattaggtcatcacctgtagattttggcaacagcaactcagcccag
aatcttcatgcacatgccgatgtccagaggtctgatgcatcctctcccaagtccggaaat
caaatacaatcacgcattggtggtgcacgttcaccaccacaacagatgtctcgcctttca
ggctccaatgaacttaacacgttagctatttctccaccaaaaccttctatacttagtgct
accagaagaacagggatctctcctttggatgctactgatgatgatcatttgaccccttca
actgaatttgagagggaggaacaagcaaaagccaagcggctggctcgtttccatgttgaa
ttaagtaggccagtagaaaatactaatgactttgtgaaagcactcaaaagctctgcagac
aagtccaaacaagccacatcagtgggaaaaactcctatgagaacaaatgatgataccgat
gaaagtactttggctgacatggattccacaagtttagctgcaattgttgggctttgccct
gatatgtgcccagaacctgagagggcagagcgtgagagaaaaggagatcttgataggtat
gaaagattacatggagacagaaacctaactactgagcttctcgctgttaaaaagtataat
aggactgctgagagagatgcagacttgataaggcctctgccagttctacagaagacaatg
gagtaccttcttggtttgctggatcacacatatgatgacagtttcttgggcttatacaac
ttcttgtgggacaggatgcgagcaataagaatggatcttagaatgcaacatttcttcaat
caagaggctatttctatgcttgagcaaatgataaggctccacatcattgcgatgcatgaa
ttgtgtgaatacaacaaaggagaaggtttttcagagggttttgatgcacacctcaacatt
gagcagatgaataaaacatcagttgagctttttcaaatgtatgatgaccataggagagaa
ggtgttttcttctcaacagaaaaggagtttcggggttattatgcgctgcttaagttagac
aaacatcctggttacaaggttgaacctgctgagttatctctggatcttgctaagatgtct
cgtgaaattagaggtagtccagagatcttgtttgcaagagaagttgcaagagcatgcaga
atggggaactttatttccttcttccgacttgcaaggaaagctacatatttgcaggcctgt
ttgatgcatgctcactttgcaaagctaaggaggcaagcacttgcttccttgcacagtggt
cttcagaatggccaaggcatccctatttcacaagttgttgagtggcttggtatggaggac
gaggatgttgaaagtctattagaataccatggttttggattgaggcagtatgaagaactg
tacctagtaaaagaaggaccttttcttaacagtgaaagtgatttcccatctggttgttca
cagcttgtgcattcaaaaaaatcgcagagggtcgttgatgatgtttcttctgggccagtt
tgtgctcctattggcaaagaaaagactgtctttccatatcctggccaactcgctgcaggc
aaaagagatctatttctaccacagaatgctcctgggattcctcctgatggcagaagggat
ttggatccatcatttcctgggcctgtttcaaccactcctgacagacagattagctcactg
ttttcaggtcctttctctccaaaagctgccaataaactattcagttcgacacatccaaag
cctctctccccaactgatgctagaaaagacgggttttcatcttttcctactgctgcttct
ccacgtactggcaagagggacatattctcaaaaacaccaaaagtagcttcaccaaaaact
gaaggcaagaccaagttggctaatgatcttatagctgaaggccgggatagtggtgttgct
gaggtcccacaaaaggtagagatgcaaacagacctactgtggtcacaagctaacacgcaa
cacgtcaatgctctggcagaaccaattgtttcacattctcttgcagatagcatctcttta
gaatactctaatatgtatggcccggaagatgacttcagggcgcatgtttctggcatcggt
acagatatggatgagggaactccaccagatcatgaagttctggttgagcctggatcacct
attagctcccctttgcctgatcatgaggaatatgaggatcatagtattagtaacagcgca
aatgatgattggttaccaattgttacgtcaaccaagaaactaatttctgacgaaaacctg
aaagcaatactgaggaaatggaggcagcgtgctgcagacaaacgattaattagggagcag
aagaatgctcttgctgttgcagcattgtgttctctatcacttggcccaccagttcataaa
aatacaatggtgcctaagctagcagttgaagaactagatattggccatgcctttaaagaa
agacaggcaagaaagcaaaggtcctggtcacggctaaatgtttccgagttgtctggtccc
attataaatgaaaataaccctgatgctagatgcctctgctggaagttgcttgtacttgtc
ccaccaggtgctatggaatctcagaccaacagttatgcctcaaaatggttacttaggaag
ctcatgggttatggaattggagagagtggattggttgtttcttcagcaggcctatcaatt
tggacagagtggatcagttttccaaacgcatgttgtttgtctgttgttaggaccagcgat
caacaagttattgataatgatactgctaacagtacaagctctgtagtatttgtagtgtct
gaaagtatttcatgggaaatgcagaaggaacggtttaacagtcttttagcctacatacca
gatggatccaatcttcctcttctgattttgagtggcgatacatataacgaaggatatgac
tatgcgtcaaagtatatcatcgacaggctaggcctcagtgggcttattggaggaaagatt
ggttcgtctttggttatttttcttgttgaaaactacacagaagaccatgccaacggtttc
tttgatgatgacaaactgcgtgagggcctgaagtggctgataagtagtttggcaaggcag
cctgatgtcacttttgtgaagactcatgagttacttctggacttcttgaatccacaactt
gagctgcttaacacccacgttgcacctggagctggccctggggattgcatttcagtattc
aacaatgctgtcaatcaactagcagaagagattttggctgcggcacgcgcaaactctagc
caatggccacctcctgagattgatcttctggagagaacaagcaatgagaggatatatgca
gaaatgttcttgcctagcattggatggtcttcgccatcaaggatccagccactgcttgca
gccatcaatagttgcaagattccagatttcagttatgatctatcttggctaaaccatggt
tctcacatgggccagcagatccaagatcagaagttgttacttcaggagtgcttggcgagg
tatttgacggaatcagtccggttgttagatgaaacccaggtggtcaccgaagtggatatt
atggtgcagaaatgtgttggccttgaactcagggattcgtcttactatcttgctcccaga
tgggtggctatcttccggcgtatttacaactggaggctagcaaagctttctactggagag
ttctcagaagcatatgttctgactcagcacctctatcagtccccagcagcagctggctct
aatggtaccacacaagggcttactgctaacaacaccaccagggatgatgtggccattttg
gaggatcacatcatgatgcctgctgtttcaactggcatctcactagacgaaatcatcgag
atcagttgcgatctcgatgctgttgatgcacagcctgtaactcctttgccaccacgactg
cctgcacaagttcatgaagaacctcaggcacctacagacaccaacgacatggcaaatggg
gcgcatggagttgatgaaatgcacataccaagaagagtggagttgggggaactggtgcca
ctcgagagggacgacaagcttgctcggctactggagcagtgcaccaagttgcaggacagg
atcgatgagacactttccatatatttttga
DBGET
integrated database retrieval system