Sorghum bicolor (sorghum): 8073139
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Entry
8073139 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8073139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8073139
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8073139
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8073139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
8073139
NCBI-ProteinID:
XP_002461156
UniProt:
A0A921RVT3
C5X4R3
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All DBs
Position
2:75423660..75427894
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AA seq
302 aa
AA seq
DB search
MASVTYIDDSLAEVIDPPKNEEMLDVTELVGDHIQHSPKPNVASYGNVRELLECPVCLSA
MYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQNFGCL
GIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIPYLVNHLKDDHKVDMHNGSTFNHRY
VKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDAEAKNYSYSL
EVGGNGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDRKELKLRVTGRIWK
EQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttacttatattgatgatagccttgctgaggttattgatcctccaaagaat
gaggagatgctggatgtcactgaacttgttggtgatcatattcagcattcaccaaaacca
aatgtggcaagctatggcaacgtgcgtgagctactggaatgccctgtgtgcttgagtgcc
atgtatcctccaattcatcagtgctccaatggacatactctgtgttctggatgcaagcca
agggttcataatcgctgtccaacgtgcaggcatgaacttggtaacataagatgtcttgct
ctggaaaaggtggctgcatcactagagcttccatgcaagtaccagaactttgggtgtttg
ggcatatacccttactattgcaagctgaaacatgaatcgcagtgccaatacagaccttat
acttgtccatatgctggatctgaatgcacagttgctggtgatattccatatctagtaaat
cacttgaaagatgaccataaggttgacatgcacaatggaagcaccttcaatcatcgttat
gtcaagtcaaatcctcatgaagttgagaatgccacatggatgctcacggttttcagctgc
ttcggccagtacttctgcctgcacttcgaggctttccagctgggcatggcgcccgtgtac
atcgccttcctccgtttcatgggcgacgacgccgaggccaagaactacagctacagcctg
gaggtcggagggaacgggcgcaagatgacatggcagggcgtgcctcggagcatcagggac
agccaccggaaggtccgggacagctacgacgggctcatcatccagcgcaacatggccctc
ttcttctcgggtggcgacaggaaggagctcaagctgcgggtcactgggaggatctggaag
gagcagtga
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