Sorghum bicolor (sorghum): 8073558
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Entry
8073558 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8073558 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
8073558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8073558
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
8073558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
PDS5
TOR1L1_N
HEAT_GCN1
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
8073558
NCBI-ProteinID:
XP_002447989
UniProt:
C5YA85
A0A921QQW3
LinkDB
All DBs
Position
6:complement(48002018..48010527)
Genome browser
AA seq
895 aa
AA seq
DB search
MGRPKGGAASSSSKKPKAKQKQRGGVDFKKYKHKVGRKLPPPKNATNTEIKSKAIVLPEQ
TMASERTGMAVNKRGLTLRELLQQTGHYNANVRRAALNGIKDIVVKHPTELKLHKVAIIE
KLQERICDTDKVVRESLYNILQSLIFPSLKEDNVISMRSTLFLLMANILNGTTHLSVDIQ
LMAFRFLELVVLNFPSSFSSYAEQTFNNFVAVLSNDRINLHDRNKLNSVLSGLGHCLSLV
AKAIENDDTSNRQTHNLSARELWKFTTAEDSAGGAFSMSNLSGKLQNLVQILINSVEVSA
SDLCAKSALDAQSSEALLSALHCLDLICRIFVHEVKKPQLKFPISETQCGPDWLRSSLLV
HLKNLWGVKRLFHGKGDDKFFIFNLRIAEIFLRSNVWIDNTVFSAEEFCLFVSSLFAKAK
TLRNKDLIEMYLSPLITCIPGLISNAPDDSKGYVLEAFTDSFRDCKVDCKLMLPYLDAVG
EMLLPEKTGIWLAENDSGVLGYHDTWIHELPGILLQSIDKAPLVTKVALELLLRIGQYFP
TVDCGSLRPFTKLFGVESLPGTMDVGPFVKLPRDCQELAISCLYYFPSLLPDIVGPLGSA
CLSDVLEPLILFRAIEVLQSTYKAGSLHITEQLSFLLLLMARFRVHPGDLVTLEGSSKVS
NWDTFKSLNRLILTSLSEMGDGSLVLELIWNNLSNAIAQKPSLHNMNGLFRIIVTLDAGT
TKLMNGDVVKLIAGYLVDASLDLSKTIEFGFQPDKTRLFQYFIKPCTIMFDKNDKVLCST
LEILKSFVTGDDHLLSSLSNLTYPGPGELSCRVCVVTTILIFLCNDQKLHRNLSLGKSVI
KGILEYIKHQLDSSVPDVTHVEKQKLKSAFEQLKTKALQLNCWARSELEGLSSAT
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcccaaagggcggcgccgcgtcctcctcctcgaagaagccgaaggcgaagcag
aaacagcgaggcggcgtcgacttcaagaagtacaagcacaaggtcgggcgcaagcttccg
ccgccgaagaatgctaccaacacggagatcaagtccaaagcgatcgtgctgccggagcag
accatggcctcggagaggacgggcatggcagtgaacaagcgtgggctcacgctgcgggag
ctcctgcagcagacggggcactacaatgccaatgtgcggcgagctgcactgaatggaata
aaggacattgttgtcaagcacccaacagagcttaaactgcacaaggttgctataattgag
aagctgcaggaaaggatatgcgatactgataaggtggtccgtgaatcgttatacaatata
ctgcagtctctgatcttcccatctttgaaagaagataatgttatatctatgaggagcaca
ctgtttttgctgatggctaatattctgaacggaacgacccatctatctgtggatatccag
ttaatggctttcagatttttggagcttgtggttcttaatttcccatcatccttttctagt
tatgctgaacagaccttcaacaactttgttgcggtactgagcaatgacagaatcaaccta
catgataggaataaacttaacagtgtccttagtgggcttgggcactgcctttccttggtt
gctaaagcgatagaaaatgatgatacatcaaatcgacagactcataacctctctgcaagg
gaactttggaaatttaccactgctgaagacagtgcaggaggggcattttcaatgtccaat
ttatcagggaagcttcagaaccttgtccaaatcctcattaattctgtagaggtttcagct
tcagatctctgtgcaaagtcagctcttgatgctcagtcaagtgaagcattgctatcagct
cttcattgtctggatctaatatgtaggatatttgttcatgaggtgaagaaacctcagttg
aaattccccatatccgaaactcaatgtgggcctgactggttgagaagttcgttactggta
catctaaagaatttatggggagtgaagcgtttgtttcatggaaagggagacgacaaattt
ttcattttcaatttaaggattgctgaaatatttttgcgctcgaatgtatggatagataac
actgtgttttcagctgaagaattttgcctttttgtgtcttctctgttcgcaaaggcaaaa
acgcttcgcaataaggatctcatcgagatgtatttgagcccacttataacttgcattcca
ggtcttatatccaatgccccagatgactcaaaaggatatgtgttggaggcatttacagac
tcatttagagattgcaaggtggattgcaagctaatgttgccatatttggatgcagttgga
gaaatgctgcttcctgagaaaacaggcatatggcttgctgaaaatgattcaggtgtgttg
ggctatcatgacacatggatacatgagctaccaggaattttgctacaatcaattgataaa
gcccccttagttacaaaggttgctttggagcttcttctaagaattgggcaatacttcccc
acagtggactgtggaagcctacgccccttcacaaagttatttggtgttgaatcattacca
ggaactatggatgttggtccttttgttaaacttcctcgcgattgccaagaacttgccatt
tcatgcctttattatttccccagtctgctccccgacatcgttgggccattgggctcagct
tgcttaagtgatgtgctggaacccctcatactgttcagggccattgaggtcctacagtca
acatacaaggctggtagtttacatataacagagcaactcagtttcttgttgctgctaatg
gcaagattcagagttcatcctggggacttagttactctggagggttctagcaaggtctca
aattgggatactttcaagtcattgaatcgcctaattttgacttccctatctgaaatgggc
gatggctctctggtccttgaattgatatggaataacttatctaatgcaattgcacaaaaa
ccatcgttgcataacatgaatggcttgtttagaattatcgttacacttgatgccggaact
actaagctcatgaatggagatgttgtaaagcttatagctggttacttggttgatgcatct
ttggatctgtctaaaaccattgaatttggttttcaacccgataagacaagactatttcag
tactttatcaagccatgcaccatcatgtttgacaagaatgacaaggttctttgcagcaca
ttggagatactcaaatcttttgtaacaggagatgatcatctactttcatctctctccaac
ttaacatacccaggaccaggagagctgtcatgtcgagtttgtgttgtcacaaccatactc
attttcttatgcaatgaccagaaactccataggaatctttctcttggcaaatcggttatt
aaaggcatcctggaatatataaagcatcagctggattctagtgtgcctgatgtaacacat
gtagaaaaacaaaagttaaagtctgcttttgagcaactcaagaccaaagcattgcagttg
aattgctgggctagaagtgagctggaggggctttcaagtgctacatga
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