Sorghum bicolor (sorghum): 8073811
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Entry
8073811 CDS
T01086
Name
(RefSeq) citrate synthase, glyoxysomal isoform X1
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00020
Citrate cycle (TCA cycle)
sbi00630
Glyoxylate and dicarboxylate metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01200
Carbon metabolism
sbi01210
2-Oxocarboxylic acid metabolism
sbi01230
Biosynthesis of amino acids
Module
sbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sbi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
8073811
00630 Glyoxylate and dicarboxylate metabolism
8073811
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
8073811
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
8073811
NCBI-ProteinID:
XP_002451828
UniProt:
A0A921R339
C5XYK7
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Position
4:9417262..9422353
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AA seq
505 aa
AA seq
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MDRADPARGRLAVLSSHLRAGGAVAGEAAGLERSPVSAAAPGPRAGALAVVDGRTGKRHE
VKVSEDGTVRATDFKKITAGKDDKGLKIYDPGYLNTAPVRSTICYIDGDEGILRYRGYPI
EELAESSSFVEVAYLLMYGNLPTQSQLASWEFAISQHSAVPQGLLDIIQSMPHDAHPMGV
LASAMSTLSVFHPDANPALKGQDLYKSKQVRDKQIVRVLGKAPTIAAAAYLRLAGRPPIL
PSNTLSYSENFLYMLDSLGNKSYKPNPRLARALDILFILHAEHEMNCSTAAVRHLASSGV
DVFTALSGGVGALYGPLHGGANEAVLKMLNEIGSVENIPDFIEGVKNRKRKMSGFGHRVY
KNYDPRAKVIRKLSEEVFSIVGRDPLIEVAIALEKAALSDEYFVKRKLYPNVDFYSGLIY
RAMGFPTEFFPVLFAIPRMAGWLAHWKESLDDPDTKIMRPQQVYTGAWLRHYTPVRERVL
PSQSEELGQIATSNATRRRRAGSAL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgccgaccccgcgcggggccgcctcgccgtgctctcctcccacctccgcgcc
ggtggcgcggtggcaggggaggcggcggggctggagaggtcgccggtgtccgcggcggcg
cccgggccccgcgccggcgcgctcgccgtggtggacgggaggaccgggaagcggcacgag
gtcaaggtctccgaggacggcaccgtgcgcgccaccgacttcaagaagattaccgctggt
aaggatgacaagggtcttaagatttatgatcctggttatcttaacactgcccctgttcgc
tccaccatctgctacatcgatggggacgagggaatccttcgctacaggggttatccaatc
gaagagttggctgaaagcagttcgtttgttgaggtggcgtaccttttaatgtatgggaat
ctgcctactcagagccaattggcaagctgggaattcgctatttctcagcattctgctgtt
cctcaaggactgttggatatcatacaatcgatgccccatgatgctcaccccatgggtgtc
cttgccagcgcaatgagcaccctttctgtcttccatccggatgcaaaccctgctcttaaa
ggtcaagatctttataagtcaaagcaggtgagggataaacaaattgtccgagtacttggg
aaggcaccaacaatagcagctgctgcctacttgagattagcaggaaggcctcccatcctt
ccttcaaatactctatcttattcagagaacttcttgtacatgctggactctttgggtaac
aaatcatataaaccaaatcctcgacttgctcgagctctagacatcctgtttattctgcat
gctgaacatgaaatgaactgctctacagctgctgttaggcaccttgcttcaagtggtgtg
gatgtcttcactgctctttctggtggtgttggagctctatatggtcctctgcatggcggt
gcaaatgaggcagtactgaaaatgttaaatgagattggaagtgtggagaatattccagat
ttcattgaaggagtaaagaacaggaagaggaagatgtcaggttttgggcaccgtgtgtac
aagaactatgaccctcgtgctaaagtcatcaggaaattgtcagaggaggtgttctcaatt
gttggacgggatccacttattgaggtggccattgctctagaaaaggcagcactgtcagat
gaatattttgtcaagaggaagctatatccaaacgtggacttctactctgggttaatttat
agggcgatgggattccctacagaatttttccctgtgctgtttgccattcctcgcatggct
ggctggctagcacattggaaagagtcactcgatgatcccgacactaagattatgaggccc
caacaggtatacaccggcgcctggctgaggcattataccccagtcagagaacgagtgctg
ccaagccagagtgaggaactcggccagattgccacctcaaacgcaactaggcgccgccgt
gctggttctgccctgtag
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