Sorghum bicolor (sorghum): 8073870
Help
Entry
8073870 CDS
T01086
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8073870
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8073870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
Ribonuc_red_lgN
Motif
Other DBs
NCBI-GeneID:
8073870
NCBI-ProteinID:
XP_002454427
UniProt:
C5Y0D4
LinkDB
All DBs
Position
4:complement(61376550..61379461)
Genome browser
AA seq
794 aa
AA seq
DB search
MATAPPCACACGAPSPSLRCPLSLPVPFSSPHPAVRLAAPPLLARRLAVSRPRAASALEA
LVLEFDNEDEDEDEGEEVEESGAGLFQGEEWAATADERDAVRSPELEVFELEELPEQWRR
SRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRHNDAAFRVYSWMVRQ
HWYRFNFALATRVADCLAREGKVEKCREVFDAMIKQGRVPAESTFHILVVAYLSVARGRC
LEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKHNLRQAEFVYHNIVTSNLAV
HKDIYAGLIWLHSYQDVIDRDRIKALRDEMKRAGFEESTDVLVSWMRAFSKEGDIKETEA
TWHWLLRSGCELPVQAYICRMELYARSGEPMKSLEIFKEMKNQNIPPNVASYHKIIEIMA
KAREIEIAEKLMDEFVESDMKHLMPAFLDLMYLYLDLDMHHKLEQTFTKCLGRCRPNRIL
YTIYLESLVRIGNVTKAEEIFGEMHKNGMIGTNAKSCNIMLRGYLSAEDYLKAESIYELM
CKKKYDIPVDSLEKLQSGLLSNKKVVKPPKPVSMKLDEEQREILIGLLLGGTQIESHAQK
GVYIVNFKFQEDSNAHSVLRVHIHERFFEWLPSACRSLNRESEIPYRFSTIPHAHFGFFA
DQFFQKGQPVLPKLVHRWLSPRVLAYWFMFGGFRLQSGDIVLKVSGGNIDGVERIVKSLQ
TQSLTCKVKRKGRFFWIGFQGSNGDSFWKIVEPYVLDSFASSTEESHNVGSDGLQDSDTY
YDDDTQRHDRESDE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcccctccctgcgcctgtgcttgcggcgctccgtccccatcgctgcgatgc
cctctctccctgccagtccccttctcttcccctcatcccgccgtccggctcgccgccccg
ccgcttctcgcgcgccgtctcgccgtgtctcgtccaagggcagcctcagcgctggaagcc
ctcgtgctggagtttgacaacgaggacgaggacgaggacgagggcgaggaagtggaggag
tccggggcgggcctgttccagggtgaggagtgggcggcgaccgccgacgagagggacgcg
gtgaggtcccccgagctggaggtgttcgagctcgaggagctgccggagcagtggcgtcgt
tcgaggatcgcctggctctgcaaggagctccccgcctacaagcactccaccttcacccgc
atccttaacgcccagcgaaagtggatcacccaggacgacgccacctacgtcgctgtccac
tgcctccgcatccgccacaacgacgccgcattccgggtgtacagctggatggtacggcag
cactggtaccgcttcaactttgcgctagccacaagagtggccgattgtcttgccagagaa
ggcaaggttgagaagtgccgagaggtgtttgatgcgatgatcaagcaaggccgagtgccg
gctgaatccaccttccacatattggtggttgcatatctcagtgttgctagagggcgttgt
cttgaggaggcatgcaccatctacaaccagatgatacagatgggtggctataagcctcgc
ctcagcctgcataattcactgttccgtgcacttgtgagtaaaacaggaggcactgcgaag
cacaatctcaggcaggctgagtttgtctaccacaatatagtcacaagtaaccttgcggtg
cacaaggatatttatgcagggctcatctggctccacagctatcaagatgtcattgacaga
gacaggatcaaagctcttagggatgagatgaagcgagctgggtttgaggagagcactgat
gtgctggtgtcatggatgagggccttctccaaggaaggagatattaaagaaactgaggca
acatggcattggcttcttcggagtggttgtgagcttcctgtgcaagcttatatctgccgc
atggagctgtatgcacgctctggtgagcctatgaaatccctagaaattttcaaggaaatg
aagaatcagaacattcctcctaatgttgcatcatatcataagattattgagataatggca
aaagctagagagatagagattgcagaaaaactcatggatgagtttgttgaaagtgatatg
aaacatctgatgccagcctttcttgacttgatgtatttgtatctggatctggatatgcat
cacaaactggaacagactttcacaaaatgccttggccgatgtcgtccaaatagaatattg
tacaccatttatctggaatcacttgtgaggattgggaatgtcacaaaggccgaggagatc
tttggggaaatgcataaaaatgggatgataggtactaatgctaagtcttgcaacatcatg
cttagaggctatctttcggcagaggactatctgaaagctgagagcatttatgagttaatg
tgtaaaaagaagtatgatataccagtggattctttggagaaacttcaaagtggcctcctc
agtaacaagaaagttgtgaagccaccaaaacctgtgagcatgaagttggatgaagagcag
cgtgagattttgattggcttgctccttggaggcacccaaatagaatctcatgcacagaaa
ggggtctacattgtcaactttaagttccaggaagattctaatgctcattcagttctaagg
gtgcatattcatgaacgtttctttgaatggctgccttcagcatgcagatcactgaatagg
gagagcgagatcccttatcgattttcaaccatacctcatgcacattttggcttctttgca
gatcagttctttcagaaaggccagcctgttctcccaaaacttgttcataggtggctttcc
ccacgggttctggcatattggttcatgtttgggggcttcagactgcaatcaggtgatatt
gttcttaaggtcagtggcgggaacatcgatggtgttgagagaattgtgaaatccttgcaa
acacaatctttaacatgtaaagtgaagaggaaaggaagattcttttggataggttttcag
ggaagcaatggcgactctttctggaaaatagttgaaccttatgtgttggacagttttgca
agttctactgaggaaagtcacaatgtaggttctgatggcttgcaagatagtgatacatat
tatgatgatgatacacagaggcatgatagagaaagtgatgagtga
DBGET
integrated database retrieval system
