Sorghum bicolor (sorghum): 8073902
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Entry
8073902 CDS
T01086
Name
(RefSeq) cell division control protein 48 homolog E isoform X2
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8073902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8073902
03009 Ribosome biogenesis [BR:
sbi03009
]
8073902
04131 Membrane trafficking [BR:
sbi04131
]
8073902
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8073902
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
8073902
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
8073902
Membrane trafficking [BR:
sbi04131
]
SNARE
SNARE associated proteins
Others
8073902
Autophagy
Aggrephagy
Other aggrephagy associated proteins
8073902
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8073902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
ATPase_2
Parvo_NS1
AAA_18
Viral_helicase1
Vps4_C
IstB_IS21
ABC_tran
AAA_7
NACHT
NB-ARC
AAA_lid_PRS2_C
TsaE
DUF815
AAA_24
ResIII
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
8073902
NCBI-ProteinID:
XP_002467173
UniProt:
A0A921UZT1
C5X0G5
LinkDB
All DBs
Position
1:complement(23887850..23892903)
Genome browser
AA seq
810 aa
AA seq
DB search
MASQGEPSASASDPKEKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLF
RGDTVLLKGKKRKDTICIVLADETCEEPKVRMNKVVRQNLRVRLGDVVSVHQCQDVKYGK
RVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAE
YCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAA
LCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPN
VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA
GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSR
LQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRR
KDNPEAMEEDEVDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFR
FSEQSATAGAAAADPFASAGAAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaaggggagccctcggcctctgcttctgatccgaaggagaagaaggattac
tcgacggcgatcctggagaggaaaaagtctccgaatcgccttgtggtcgatgaggccacc
aacgacgataactccgtcgtcgcgctgcaccctgacaccatggagaggctgcagctcttc
cgcggcgacaccgtcctcctcaagggtaagaagaggaaagacactatttgcattgtcctt
gcggatgaaacctgtgaggagcctaaggttcggatgaacaaggttgtccgccagaacctg
agggtgaggcttggtgatgtggtttctgtccaccagtgccaggatgtgaaatacgggaag
cgtgtgcacattcttccaattgatgatacagttgaaggcattaccgggaacttgtttgat
gccttcttgaaaccatacttcctagaagcctacagacctttgaggaaaggagaccttttc
cttgtcaggggtggaatgagaagtgtggaattcaaagttatagagactgatcctgctgaa
tattgtatcgttgcgccagatactgaaatattctgtgatggggagcctattaagagggag
gatgaggagcgtcttgatgaagttggttatgatgatgttggtggagttagaaagcaaatg
gcccaaatcagagagcttgttgagcttccactacgccatccccagcttttcaaatctatt
ggtgtaaagccaccaaagggcatattgctgtatggaccacctggttctggaaagactctt
attgctcgtgctgttgcaaatgagactggagcctttttctttctgatcaatggcccagag
attatgtcgaaactagcaggagagagtgagagtaatctcagaaaggcttttgaagaagca
gaaaagaatgctccatctatcattttcattgatgaaattgattccattgcacccaagaga
gagaagaccaatggagaagtagagcgtcgtattgtttcacagctattgactcttatggat
ggactaaaatctcgttcccatgttattgttatgggtgctacaaacagaccaaacagcatt
gatccggctcttcgaagatttggaaggtttgaccgggaaattgacattggagttcctgat
gaagttggccggcttgaggttctccgcattcacactaagaacatgaaactagctgaagat
gttaatttggaactcatttcaaaggatacccatggatatgttggtgctgatcttgctgcg
ctttgcactgaggctgctctccagtgcattcgtgagaagatggacattatagatcttgag
gatgagacaatagatgcagagatattgaactcgatggctgttacaaatgaccacttcaag
accgcgcttggaacaagcaacccatctgctctacgtgaaactgttgtcgaagtcccaaat
gtctcttgggaggatattggtgggctggagaatgtcaagagggagctccaggagactgtt
caatatcctgtggagcatccagagaagttcgagaagtttggcatgtctccatcgaaagga
gttttgttctatggtcctcctggttgcggtaagaccttgttggcaaaggcaattgccaat
gagtgccaggctaacttcatcagtgtcaagggtcctgagttgcttaccatgtggtttggt
gagagtgaagccaacgtccgtgaaattttcgacaaggctcgccaatctgctccttgtgtc
ctcttctttgatgagcttgactcgattgctactcagagaggaagcagtgtgggtgatgct
ggaggtgcggctgatagagtgcttaatcagctactgacagagatggatggcatgaatgcc
aagaaaactgtgtttattattggggctacaaacaggcctgacatcattgaccctgctctg
ctgaggccaggacgtcttgaccagctgatctacattccactgcctgatgagcagtctagg
ctccagatcttcaaggcttgccttaggaagtcccctgtggcgaaggacgtggacttgaat
gctcttgctaagtacacgcaagggttcagtggagcagatatcacagaaatttgccagcgt
gcctgcaagtatgcaatcagagagaatattgagaaggacattgagagggaaaggcggaga
aaggacaaccctgaggcgatggaggaagacgaagtggacgagattgctgagatcaaggcg
gctcactttgaagagtcgatgaagtacgctcggcgtagtgtcagtgatgctgatattcgc
aagtaccaggcgtttgcccagacattgcagcagtcccgtgggttcggcagtgagttccgc
ttctcggagcaatcggcgacagctggtgctgctgcagctgatccgtttgcctctgctggt
gctgcggctgatgatgacgatctatacagctag
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