Sorghum bicolor (sorghum): 8073997
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Entry
8073997 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8073997
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8073997
04121 Ubiquitin system [BR:
sbi04121
]
8073997
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8073997
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8073997
Membrane trafficking [BR:
sbi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
8073997
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8073997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
8073997
NCBI-ProteinID:
XP_021317897
LinkDB
All DBs
Position
6:44899061..44903394
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AA seq
536 aa
AA seq
DB search
MGKFMHDNRLLSPSEVNRRQYSLAAVAVGLGLGVAGLCKALHSGLSIPWVSPRNLFLGSG
RVYYVGGLRNLGNNCFLNVILQALASCGGFISFLDNLLATDGLLPEEKAVRMPLLLALSS
LLEDLSIVRDERTVLNPHGVMHALSFYVSHFNLTRQQDASEAFLHLLISLRDEFSHCYVP
HRSSLADITLSHSKVYKQREGNLPECKRWKQNLFGPFDGTIGSILSCRNCSSVLSLDFEN
FHCLPLSPVLNTNGDITSGCSLVDCLKYFTVVEHLDNYRCDRCWHIIAAKYLSLKSEVDE
EKVSKLHTCVDYGTCSCRNMFPLEKMPCSPSSRATKQLIISQCPKILCIHLLRASVGLDG
EPIKHQGHISFPLLLNLSPFAGGASGAGPLAMNVQRDGQQALHLYRQLNMQMSLNVLPTG
GYLSSQPCKEEATNDSGRSIHMANVDVSSSSSSSSPQPSMSKLYGLSAVVEHYGKCGGGH
YAVYRRVASNPDPDDPGKPLAGLGRRWFYISDGQVSEVSEEDVLCAEATLLFYERL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtttatgcatgacaatcgactgctttctccgagcgaagtaaatagacgtcag
tatagtcttgcggcagttgctgtcggtttgggactaggagttgccgggttatgcaaggca
ttgcatagtggtttgtccataccatgggtttctccaaggaatttatttttggggtcaggg
agagtatactatgttggaggtctgcgaaatcttggcaacaattgctttcttaatgtcatc
ctccaggcacttgccagctgtggtggttttatttcctttctagataatttgcttgcaact
gatggcttgctacctgaagaaaaggctgtaagaatgcctcttcttcttgctctaagttct
ctcttggaagacttgagcatagttcgagatgaaagaactgtgttgaatccacatggagta
atgcatgctttgagtttctatgttagtcacttcaatttgaccagacagcaggacgcttcg
gaagcttttctccatcttctgatctcactgagggacgaattttcccattgttatgtacca
cataggagttctctggcagacatcaccctttctcactccaaagtatacaagcaaagggaa
ggtaacctgcctgaatgcaagcgctggaaacaaaatctatttggtcccttcgatgggaca
attggcagcatattgtcttgcagaaactgttcatctgtgctgtcattggactttgagaat
ttccactgcttgcctctttcaccagtgcttaatacaaatggggatattaccagtgggtgt
agcttggtggattgcctaaagtacttcactgtggtggagcaccttgacaattatcgctgt
gatcggtgttggcacatcattgctgccaaatatctatctcttaaatcagaagttgatgag
gaaaaggttagcaagcttcacacctgtgtcgactatggcacttgcagttgcaggaatatg
ttccccctggagaaaatgccatgttcaccatcttcacgagcaacaaagcagttaattatc
agccagtgcccaaagattctatgcattcatttgctacgtgcttcagtcggtcttgatggt
gagcccatcaaacatcagggacatatttctttccctttacttctcaatctgtccccgttt
gcgggaggtgcatcgggcgctggacctttagcaatgaatgtgcaaagagatggccagcaa
gctcttcatctatatcgacaactgaatatgcagatgagcttaaatgtcttaccgactgga
gggtacttatcaagtcagccatgtaaggaagaagcaacaaatgatagtggccgctcaatt
cacatggcaaatgttgatgtgtctagtagttcatcatcatcatcaccgcagccatcaatg
agcaagttatatggtctctcggctgtcgtggagcattacgggaaatgtggaggagggcat
tatgcagtttacaggagagttgcatcaaatcctgaccctgatgatccagggaaaccactt
gcaggccttggcaggcggtggttttacatctcggatggccaggtatcagaagtttcagag
gaggatgttttgtgtgcggaggccaccctcctcttctatgaaagattgtag
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