Sorghum bicolor (sorghum): 8074058
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Entry
8074058 CDS
T01086
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8074058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8074058
Spliceosome [BR:
sbi03041
]
Complex C
Other components
Step II factors
8074058
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Tudor_3
Motif
Other DBs
NCBI-GeneID:
8074058
NCBI-ProteinID:
XP_002443802
UniProt:
A0A921QIE9
C5YMK6
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Position
7:2408832..2413022
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AA seq
535 aa
AA seq
DB search
MATASVTFKSREDHRKQLELEEARKAGLAPAEVDEDGNEINPHIPQYMSSAPWYLNAEKP
SLKHQRKWKSDPNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRNVGAKW
TNVNIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKYLKEQQLKKLE
EKDTEKDDENVGSEDDEEDGLRIDEAKVDESAQMDFAKVEKRVRTTGGGSTGTVRNLRIR
EDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFYVGDNQNRLSGQALEFKQLNIH
AWEAFEKGQDIHMQAAPSQAELLYKSFKVKKEMLKSEHKDKIMEKYGNAASEDTIPRELL
LGQSEREIEYDRTGRIIKGQDVSLPKSKYEEDVFINNHTTVWGSWWKDHQWGYKCCKQTI
KNSYCTGLAGIEAAEASADLMKANMARKEAAEDEPVQHEEKRLATWGTDVPQDLVLDPKK
LAESLKKEKGRRNEERDEKKRKYNVHFDDQVTVEDMEAYRMTKIHHDDPMRAFLK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcttcagtgactttcaagtcacgggaggatcaccggaagcagctcgaactc
gaggaggcgcgcaaggcggggctcgcccctgcggaggtcgacgaggatggaaacgagatc
aatccccatatcccccagtatatgtcctcagctccatggtatcttaatgccgagaagccg
agtttgaagcatcaacggaagtggaagtcagatccgaactacaccaagtcgtggtatgat
aggggtgcaaagcttttccaggccaacaagtacaggaaaggcgcttgcgaaaactgtgga
gccatgactcatgacaagaagtcttgcatggaacggcctcgaaatgtgggagctaaatgg
acaaatgtcaacatagctcctgatgagaaagttgaatcatttgagctggactatgatgga
aagcgtgatcgttggaatggttatgacccatcgacctacactcgtgttatcgctgactat
gaagctagagaagaggctaggaaaaagtatctgaaagagcagcagctcaagaaacttgag
gagaaggatactgagaaggatgatgagaacgtgggtagtgaagatgatgaagaagatggc
ctgaggatagatgaggccaaagttgatgagagtgcccagatggactttgctaaggtagag
aagcgtgtgcgcacaactggtggtggaagcaccggtactgttaggaacttgcgtatcaga
gaagacacggcaaaatatcttttgaatcttgatgtcaactctgcatattatgatccaaaa
acccgttccatgagggaagaccccttgccagatgctgatccaaatgataagttctatgtg
ggtgacaaccaaaatcgtcttagtggtcaagctctggagtttaagcaactcaatatccat
gcatgggaagcttttgaaaagggtcaagatatccatatgcaagcagccccatctcaagca
gaactactgtacaagagcttcaaggtcaagaaagaaatgttgaagtctgaacataaggat
aaaattatggagaagtatgggaatgctgcatcagaagatacaattcctcgggagctactt
cttgggcaaagtgagagagagattgagtatgaccgtactggtcgaataatcaaaggacag
gatgtatctcttcccaagagcaaatatgaagaggatgtattcattaataatcacacaact
gtgtggggttcatggtggaaagatcatcaatggggctacaagtgctgcaagcagactatc
aagaatagttactgcacaggcttggctggaatagaagctgctgaggcatcagcagatcta
atgaaggccaatatggcccgcaaggaggccgcagaagatgaacctgtacaacatgaagaa
aagcgattagccacttggggaactgatgtgcctcaggatcttgttcttgatccgaagaag
ctcgcggaatctctaaagaaggagaaaggaaggaggaatgaggagagggatgagaagaag
aggaagtataacgtgcactttgacgatcaggttactgtagaagacatggaggcctaccgt
atgacgaagattcaccacgatgatcctatgagagcttttctcaagtga
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