Sorghum bicolor (sorghum): 8074096
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Entry
8074096 CDS
T01086
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03430
Mismatch repair
sbi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
8074096
03460 Fanconi anemia pathway
8074096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8074096
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
8074096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
8074096
NCBI-ProteinID:
XP_002456964
UniProt:
C5XIK7
A0A921UR08
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All DBs
Position
3:73528688..73535531
Genome browser
AA seq
721 aa
AA seq
DB search
MDVDDPSPRVGGDPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTVSVTV
KDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVG
HVTVTTITEGQLHGYRVCYKDGVMENEPKPCAAVKGTQVMVENLFYNMVARRKTLQNSND
DYPKVVDFISRFAVHHINVNFSCRKHGANRADVHSSSTSSRLDAIRNVYGASVVRDLIEI
EVSDEDAGDAVFKMDGYISNANYVAKKITMILFINDRLVDCTSLKRAIEFVYSATLPQAS
KPFIYMSINLPSEHVDVNIHPTKKEVSLLNQERIIETIKNTIEEKLRNSNTTRIFQTQAV
NSSALTQVYTQKDKGTDVKIASGMKSQKTPVSQMVRTDPRNPSGRLHTYWHGQSSNLEKK
SDLVSVRNVVRSRRNPKDAGDLSSRHELLMEIDSHYHPGLLEVIKNCTYVGLADEIFALI
QHNTHLYLVNVVNVSKELMYQQALCRFGNFNAIQLSEPAPLQELLLMALKDDELIGDENE
EEKLEIAEVNSKILKENAEMINEYFSIHVDQDGNLTRLPVVLDQYTPDMDRLPEFVLTMG
NDVTWDDEKECFRTTAAAIGNFYALHPPILPNPSGSGVQFYKKNKDCMASGEHVDSTDED
DIDHELLAEAETAWSQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQIASLEKLYKIFER
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgatgacccctcgccgcgcgtcggcggggacccgccccgcatccgtcggctg
gaggaatcggtggtgaaccgcatcgcggcgggggaggtgatccagcgcccgtcgtcggcg
gtcaaggagctcgtcgagaacagcctcgacgccggcgcgtccacggtctccgtcaccgtc
aaggacggaggactcaagctcatacaagtttccgacgacggccacggcatccggtttgag
gatttgcctatattgtgtgaaaggcatactacctcaaagttatctgcatatgaggattta
cagaccataaaatctatgggctttagaggggaggccctggccagtatgacttatgttggc
catgttactgtgacaacaataacagagggccaacttcatggctaccgtgtttgttataaa
gatggagtaatggagaacgagccaaaaccctgtgctgcagttaaaggaactcaagtcatg
gttgaaaatttattttacaatatggtagctcgtagaaaaacattgcagaactccaatgac
gactaccccaaggttgtagatttcattagtcgttttgcagtccatcacatcaatgtgaac
ttttcctgcagaaagcatggagccaatagagcagatgttcatagttcgagcacatcttct
agactggatgctataaggaatgtctatggggcttctgttgttcgtgatctgattgaaata
gaagtttcagatgaggatgctggagatgcagtcttcaagatggatggttatatatcaaat
gcaaattatgtggcaaagaagatcacgatgatccttttcataaatgataggcttgtagac
tgtacttctttaaaaagggcaattgaatttgtgtactctgcaacgttgcctcaagcatcc
aaacccttcatatacatgtccatcaatcttccatcagaacatgtggatgtcaatatacac
ccaaccaaaaaagaggttagcctcttgaatcaagagcgtattattgaaactataaaaaat
accattgaggaaaaactgaggaattctaataccacaaggatattccaaactcaggcagta
aactcctcggcacttactcaagtttacacacagaaggacaagggtactgatgtcaaaata
gcctctggaatgaaatctcaaaagactcctgtgagccaaatggtcagaactgatccacgc
aatccatctggaaggttgcacacttactggcatgggcaatcttcaaatcttgaaaagaaa
tctgaccttgtttctgtcagaaatgttgtaagatcaaggaggaatccaaaggatgctggt
gatctatctagccgtcatgagcttcttatggaaatagattctcactaccatcctggtctt
ttagaggttattaagaattgcacatatgttggcctggctgatgaaatttttgctttgata
cagcacaatactcacttataccttgtcaatgttgtaaatgttagtaaagaactcatgtac
cagcaagctctgtgccgttttggaaacttcaatgctatacagcttagtgaaccagctcct
cttcaggagctgctgctgatggcactgaaagatgatgaattaattggtgatgaaaatgaa
gaggagaaactggagattgcagaggtaaactcgaagatactgaaagaaaacgctgagatg
attaatgagtacttctctattcatgttgatcaagatgggaacttgaccaggcttccagtt
gtacttgatcagtacacccctgatatggatcgtctcccagagtttgtgttgactatgggg
aatgacgttacctgggatgatgagaaagagtgcttcagaacgacagctgctgctattggg
aacttctatgcactccatccacccatccttccaaatccatcagggagtggcgttcagttt
tacaagaaaaataaagattgcatggcgagtggcgaacatgttgatagtacagatgaagat
gacattgatcacgaattacttgcggaagcagagacagcatggtcccaacgcgagtggacc
attcagcatgtcttgtttccatccatgcgacttttcctcaagcccccaaagtcaatggca
acagatggaacctttgttcagattgcttctctggagaaactttacaagatttttgaaaga
tgttag
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