Sorghum bicolor (sorghum): 8074198
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Entry
8074198 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 17
KO
K27629
cyclic nucleotide gated channel 17
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8074198
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8074198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8074198
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8074198
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
8074198
NCBI-ProteinID:
XP_002460654
UniProt:
C5X7U0
A0A921RRG9
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Position
2:67240520..67245949
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AA seq
713 aa
AA seq
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MFGSRVQDEVEMQRRPNNRIFPDERQNQSKPLYQTARADRFGANRMDLKNPEKLKVLNEG
NKPWHQRILDPGSNIVLRWNRVYLVACLFALFIDPFFYYLPLIRKNGNVSSCVAKDQGLS
IRITVLRSLADLFYMLNIAIKFHTAYVDPKSRVLGKGELVVDIKKIQRRYIRTDFFVDIL
AAVPLPQVTVWLIMPAIESSDYNIRNTTFALVIVVQYFIRMYLIIPLSNQIIKAVGVVAK
SAWGGAAYNLLLYMLASHITGAIYYLLSVERQITCWDQQCIAESNDTNCNLRFISCENSG
SDDYSVWAKNTSIFANCDATNPNNISFNYGMFLSALGKGAVSSPFLEKYFFCLWWGLLQL
SSSGNPLITSAFITENLFAIAIGAISLILFAQLIGKMQTYLQSISKRLEEWRLRQRDMDE
WMRHHQLPSHLQERVRRFVQVKWLATRGVEEESILQALPADIRRDVQRHLCLDLVRRVPF
FSEMDDQLLDAICERLVSFLCPENTYISREGDPVNEMLFIIRGKLESSTTNGGRSNFFNS
IILRPGDFAGEELLTWALLPKTNVHFPLSTRTVRSLTEVEAFALRAEDLKFVANQFRRLH
SKKLQHTFRFYSHHWRTWAACFIQAAWRQHQRRKLAESLSRWESYSWWSEDHPSGDKPRQ
EGTSSGGTRTIAEGAIAHMHKLASASRRFRTEDIAIRRLQKPDEPDFSADHFD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtccagggtccaggatgaggtggagatgcagaggaggcctaataacaggatc
tttcctgatgagagacaaaatcaatctaagccattatatcaaactgcacgggccgacaga
tttggtgcaaatagaatggatctgaagaatcctgagaagcttaaggtgttaaatgaaggc
aacaaaccgtggcaccagcgtattctagaccctgggagtaatattgtactgagatggaac
agggtgtaccttgtggcatgtttgtttgctcttttcatagatccttttttctattacctt
ccattgattagaaaaaatggcaatgtatcttcatgtgttgccaaggaccagggactgagc
ataagaatcactgtcctacgatcacttgctgacttattttacatgttgaacatagcaatc
aagtttcatactgcatatgtcgatccaaagtccagagtcctcggaaagggagagcttgtt
gtggatattaagaagattcaacgaagatatataagaactgatttctttgtagacatactt
gcagccgtgccacttccacaggttactgtgtggttaattatgcctgcgatagaaagctca
gattataacatccgaaacactacatttgctctcgtaattgtggttcagtatttcataaga
atgtatctcatcatccctttaagcaatcagattatcaaagctgttggagtagttgcaaag
tcagcttgggggggagcagcatacaatcttctgctctacatgcttgcaagccatattact
ggtgcaatatattaccttctctccgttgaacggcagattacatgctgggatcagcagtgc
attgctgagtccaatgatacaaattgcaacttgagatttataagttgtgagaatagtggt
tctgatgattattctgtgtgggcaaaaaatacaagtatatttgccaactgtgatgccact
aatcctaataatatatcatttaactacgggatgtttcttagtgcactgggaaaaggcgct
gtctcatctccattccttgagaagtacttcttttgtctatggtggggcttgctgcagctt
agttcaagcggaaatcctctcataacaagtgcatttatcacagagaacttatttgctata
gctattggcgctatcagtctcatactctttgctcagttgattggcaagatgcagacatac
ctgcagtctatcagtaaaaggcttgaagagtggaggctgaggcaaagggacatggatgag
tggatgagacaccatcaactcccatctcatcttcaagaacgtgtccgacggtttgttcaa
gttaaatggcttgctacaagaggagtggaagaagagtccatcttgcaagctttgcctgct
gacatacgtcgggatgtgcagcgtcatctttgtttggaccttgttagacgtgtacccttt
ttctctgagatggatgaccaacttcttgatgctatctgtgagcggctggtgtctttcctg
tgtcctgagaatacatacatctctcgcgagggtgatcctgtgaatgagatgctttttatt
atacgcgggaaactagagagctcaacaacaaatggtggccgtagcaacttcttcaactct
atcatcctgcgccctggtgatttcgctggtgaagagctgctcacttgggccctacttcca
aagaccaatgtccacttcccgctttcaacaaggactgtacggagcctcacagaggtggaa
gccttcgctctgcgagctgaagacctgaagttcgtcgcaaaccagttccgaaggcttcac
agcaagaagctccagcacacattccggttctactcccatcactggaggacctgggctgcc
tgcttcatccaagctgcatggcggcagcaccagagaaggaagctggctgagagcctcagc
cgatgggagtcatactcatggtggtcagaggatcacccatctggtgataaacccagacag
gagggcacctcaagtggcggcacaaggacgattgctgaaggtgccattgcccatatgcat
aagcttgcctctgcttccagaaggttccgcaccgaggacattgctattcgcagattgcag
aagcctgatgaacctgatttctccgcagaccattttgattga
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