Sorghum bicolor (sorghum): 8074306
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Entry
8074306 CDS
T01086
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8074306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8074306
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8074306
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
8074306
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
8074306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
8074306
NCBI-ProteinID:
XP_021317892
LinkDB
All DBs
Position
5:complement(7957121..7969126)
Genome browser
AA seq
962 aa
AA seq
DB search
MTPSYSSGPAGPAVGRRAATFAGASVFLSRSLVAPEVFDAVHDALRLNGAEVLLCANPNR
TGPLDYHVISSSSHERFADLRAKGCNLLGPQCILSCAKERRFLPKQSYTCCLAMDGVKTL
CSGFEKSEKVRIEELVTAMGGHLLTRHSMDVDFVIVKDVTVAKYKWALNILKKPIVTMKW
LEQCWIEHRVVPHEPYRILPFTGLNICLTKLDPGERKELEKMVVQNGGQFSPCLTRKCTH
LVANKPGGDKYVVAQKWGNIHIVNPRWVEQSVARRACQDESSYLVCQSSSAFSGSKSSFK
EQQNPEISSASASFQPVPATSVDDSVSMSQYLPASFGDAARISIATPSVQETNEMQVDSR
VAEDSEPENDDLYLSNCRIALVGFEEKELLRLVMMIRNGGGSRHILLSEKLTHIVIGTPS
DDEKKEVRCLAAWGVINIVKVTWLEDCNRAKKEVKVSPMHIATELLLKGFSQVSMENSAD
TRETKVGKSSGGIFHVPTVNDLHDKHHEKDVSSERKPKRGKHENSISKTRSAARAAKLSQ
QNGVVNVSEHQPQYQVTSTMNSGSSRSNIFKGRTFSFSNSFSHDKRPEVVDWVRDGGGVM
VDDIQSTAVDFIIECHGQNSLPCDFSHSTVVSTQWIRSCLEENCLQDVGSHPIFSPLRCR
IPFPGFESFQFCISQYEEKERQLLKNLCFLLGAKFTEKAYKRVTHLICKFASGPKYEVYT
KRGTPTITSEWLYECVKQDKLLPVEHFQPKPITSQDQDANACTISQYSTQATRFGSSEVL
SDCQVTTNNATHNSAGAGISAVNEETTMPAVSRKRRISVPVKVNDTCGNIGRSEKHLENS
SGPDVADAIEVLSSKIQDVQSPRSIFEPDNSVVQEQKDTHSFGISRSWLNMQPTQDNTPG
TKVKNLNSAPVPSPAPITYYPFSETQTESQIVGYEEDLTGMQKIIDRVRSQSINVTPSSE
IP
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtcctacagctccggccccgcggggcccgccgtggggcggagggcggcgacc
ttcgccggcgcgagcgtgttcctgtcgcggagtctggtcgcccccgaggtgttcgacgcc
gtgcacgacgcgctccgcctcaacggcgccgaggtcctcctctgcgccaacccgaaccgc
acggggccgctcgactaccacgtcatctcatcctcctcccacgagaggttcgccgatcta
cgggccaaaggctgcaatttgctaggaccacagtgcattctttcctgtgctaaagaacgt
cgctttctacctaaacaaagttatacttgttgccttgcaatggatggggttaaaacactt
tgttcaggctttgaaaagtcggagaaggttaggattgaagaactagtgacagccatggga
ggtcatttgctaaccagacattccatggatgtggattttgtaattgtgaaggatgtcaca
gttgccaaatataaatgggctctgaatattttgaagaagcccattgtcaccatgaagtgg
ttagagcaatgctggattgaacatcgtgttgtgcctcatgaaccttacaggattcttccc
tttactgggttgaatatctgtctcactaaactggatccaggtgaaaggaaggaattggag
aaaatggtagtgcagaatggcggccagttttctccctgtctcacacggaagtgcacccat
ttagtcgcaaataaacctggaggtgacaaatatgtcgtggcccaaaaatggggcaatatc
cacattgtgaatccaagatgggttgaacaatctgttgctcgaagagcttgtcaagatgaa
agtagctacctcgtttgtcagagttcatctgcttttagtggttcaaagagttcctttaag
gagcaacaaaatccagagatcagtagcgcaagcgcaagctttcaacctgttccagcaaca
tcagttgatgattcagtatcaatgtcacaatatttgcctgcttcatttggtgatgctgca
cggatcagcattgccacacctagtgtccaagagacaaatgagatgcaagttgatagtcgt
gttgctgaggactcagagccggaaaatgatgatctatatttatcaaattgccgaattgct
ctggtgggttttgaagagaaagagttgttaaggctcgtcatgatgatacgcaatggaggt
ggatcccggcatattttgctaagtgagaagcttactcatattgttattggtacaccttca
gatgatgaaaaaaaggaggtaagatgtctggctgcatggggtgtaataaatatagtgaaa
gtaacatggttagaagactgcaatagagcaaaaaaggaagtgaaagtatccccaatgcat
atagctactgagctcctcttgaagggattttcacaagtgagcatggaaaattctgccgat
acacgggaaactaaggttggcaaaagctcaggtgggatttttcatgttccaactgtcaat
gacttacatgacaaacatcacgaaaaagatgtgtcatctgaaagaaaaccaaaaagaggc
aaacatgaaaacagtataagtaaaacccgatcagcagccagggctgcaaaattaagtcaa
cagaatggagtggtcaatgttagtgagcaccagccccaatatcaagtgacatccacaatg
aattctggaagcagcagatcaaatatattcaaagggagaacattcagtttctcaaattca
ttttctcatgacaagagacctgaggttgttgattgggtcagagatggtggaggcgttatg
gtggatgacatacaatcaactgctgtggatttcataattgagtgccatggacaaaacagc
ttgccttgtgacttctctcattccactgttgtttcaactcagtggataagatcatgtttg
gaggagaactgcttacaagatgtcgggagtcatcctatcttctctcctttgcgctgtcgc
atcccgttcccaggattcgaaagcttccaattctgtatttcacaatatgaagagaaagaa
agacagctgctgaagaacttgtgctttctactgggcgctaagtttacagaaaaagcatat
aagagagtaacccatctcatctgcaagtttgcaagtggtcctaagtatgaggtttacacc
aaaagaggaactccaaccattacttccgagtggctctatgagtgtgtaaaacaggataaa
cttctccctgttgagcactttcagccgaaaccaattacatcacaggatcaagatgctaat
gcgtgcactatcagccaatattccacacaggcaaccagatttggttcctctgaggtgctt
agtgattgtcaagtaacaacaaacaatgcaacacacaattctgctggtgctggtatttct
gcagttaatgaagaaacaactatgcctgctgttagtagaaagagaagaatatctgttcct
gtcaaggttaatgatacgtgcggaaatatcggaagatctgagaaacacctcgagaatagc
tctggccctgatgtcgcagatgccatagaggttctatcatcgaagattcaggacgtgcaa
tctcccaggagcatatttgaacctgacaattctgttgttcaagagcagaaagatacacac
tcctttggcatttcaaggagctggttgaacatgcaaccgacgcaagacaacacccctggc
acaaaggttaaaaacttaaactccgcaccagtcccctccccagctcccattacttactac
cctttcagtgagacgcagacagaatctcagatcgttggatacgaagaagatttaacaggc
atgcagaagatcatagacagggttcggtctcagagcattaatgtgactccgtcgagtgag
attccttag
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