Sorghum bicolor (sorghum): 8074472
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Entry
8074472 CDS
T01086
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8074472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8074472
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
8074472
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
8074472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
8074472
NCBI-ProteinID:
XP_021308567
LinkDB
All DBs
Position
2:complement(77028102..77033249)
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AA seq
552 aa
AA seq
DB search
MAYMAAVAPVPWWPPPPELAPVGFPDASSPAGYPKPQTLPFLLAPTPPPPPPPPPLPAGY
PLLPPPAPIIIQLQPDPSFVAEVDQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKI
VMHWANAVAYEQSVPQGLATATVLTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVL
RQLLEGRPEVSELQTIEKAKVPLMRFRFTGIAVDFTYAQLPVIDALKAINTFSTQLLQKI
DTRSWRSLSGVRVNEQIVQLVPNAEKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILA
AYVCRKFPDASVNGLFAVFFQTFAHWPWQVPVSLHDEPTTSLHSEGLLMPIVMPCTPPEF
CVSNVTRGSFKKIREELTRGYALTRDSLRHDFQWTWLFEPFPYDKKYQQFLRIALCAPTF
AELRDWAGWVKSRFRLLILKLERAGIECDPCPSEEVDHTDNDPNVVFYWGLIPERIIQVD
TSSLKEDFMESITNDVYGTVKCTHSDVTISVVGLPQLPKSMRSHVHWQYMQRCMMAYEGT
DEGQSAGWLGLG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacatggcagctgtcgcgcccgtgccctggtggccgcctccaccggagctggcg
cctgtgggcttccccgacgcgtcctctcccgccggctatccaaagccccaaaccctaccc
ttcttgctagcgccgacccctccgccaccgccgccgccgccgccgctgcctgcggggtac
cctcttcttcctcccccagccccgatcatcatccagctccagcccgaccccagcttcgtc
gcggaggtggatcagcgtcgcagcagttcccttgtgcagttcttgaaggatgagggggcc
gttccgtcgccggaggatgaaaagaagagggagaaggtgatccgagagctcaagaagata
gtgatgcattgggccaacgcggtggcctatgagcagagtgtgccccaggggctggccact
gctacggtcttgacatacggctcttacaccttaggggctcatggacctgaatctgacatc
gatgtactttgcgttggaccttgtattgcaacactgcagtaccatttctttgttgttttg
agacaacttcttgagggcagacctgaagtatcagaactgcaaactattgagaaggctaag
gttcccttgatgcgatttagatttactggaattgcagttgatttcacatatgcccagctc
cctgttattgatgcattaaaggccataaatacatttagcactcaactactacagaaaata
gacacacggagctggaggagtttatctggagttcgtgtcaatgaacaaattgttcagcta
gtaccaaatgcggagaagtttcaagctctgttgcgatgcatcaaactgtgggctaggaaa
agaggacttcattgtcattatcttggcttctttgctgggattcatttagcgatccttgcg
gcttatgtctgtcggaaatttccagatgccagtgtcaatggtttgttcgcagtgttcttt
cagacttttgctcactggccttggcaagttccagtaagtctacatgatgagccaactacc
tccttgcattcagaggggcttctcatgcccatagtgatgccttgtaccccgccagagttt
tgtgtgtccaatgtgacaagaggcagcttcaaaaaaataagagaggaacttacacgtggt
tatgctttgacaagggattcattgagacatgatttccagtggacctggctttttgaaccc
tttccatatgataaaaaatatcaacagtttcttcgcattgctttatgtgcgccaacattt
gccgagctacgagactgggctggatgggtgaaatctcgattccgtctcctgattctaaag
ctggaaagagctggcattgagtgtgatccatgcccctcggaggaagttgatcatacagac
aatgaccctaacgtagtcttctactggggcctcatccctgaaagaatcattcaggttgac
actagctccctgaaagaagatttcatggaaagcatcaccaatgatgtctatggcacggtg
aagtgcacgcattcagatgtgacaatatctgtggttgggctgccacagttgccaaagagt
atgcgcagccatgttcactggcagtacatgcagcgttgtatgatggcctacgagggcaca
gatgaaggccagagcgcaggttggctaggacttggttag
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