Sorghum bicolor (sorghum): 8074476
Help
Entry
8074476 CDS
T01086
Name
(RefSeq) alpha-L-arabinofuranosidase 1 isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00520
Amino sugar and nucleotide sugar metabolism
sbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8074476
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
8074476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
8074476
NCBI-ProteinID:
XP_002463418
UniProt:
C5X6A9
A0A921RUX7
LinkDB
All DBs
Position
2:complement(77144993..77150582)
Genome browser
AA seq
666 aa
AA seq
DB search
MGVQRANGASLLRALVVVCALCWALSSRCAEGQNSNGQLSVNASPQNARKIPDKMFGIFF
EEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLIIGDESSIIVGTDRTSCFERNPVA
LRMEVLCASKKTNACPSGGVGVYNPGYWGMNIEKGKVYKVSLHIRSSDTVSLTVSLTSSD
GLQKLAAHTITGSKKTFAKWTKIEFHLRSNQNNTNSRLQLTTSKSGVVWLDQVSVMPMDT
YMGHGFRKDLASMLANLKPQFLKFPGGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWG
YWTDDGLGFFEFLQLAEDLGASPVWVVNDGASLNEEVSTKTIASLVKDVVNGIEFARGGP
KTTWGSVRASMGHPESFKLDYVSIGNQECWMLYYRGNYQKFYSAIKSAYPDINIISSCDR
PTISPSNPADLYDVHVYTSLTNMFSKTSMFDNTPRGAPKAIVSEYAVTGNDAGKGTLVAA
LAEAAFLIGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSWQHYGCPNYWMLHFFKE
SSGATLHPTAIQISNYDQLLASAITWQNAKDRSTYLRIKVVNFGNQAVDLNISIAELPTG
IKKSGSKQMVLTSSSPLDENSFQQPEKVVPVLSPMVNVGQQMGASVGPYSLTSFDLLLEP
SKHDSI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgcagagagccaatggcgcttccttgctccgtgcactagttgttgtgtgcgcc
ctgtgctgggcattgtcttctcggtgtgcggaggggcagaactcaaatggtcagctgagt
gtgaatgcctcgccacagaatgctaggaagatccctgataagatgtttggtatctttttc
gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga
ttcgaggccggtgggcctaatacaccttccaatattgatccatggctgatcattggggat
gaatcaagtatcattgttggaactgatcggacatcatgctttgaacgtaacccggttgca
cttcggatggaagttctttgtgcttctaagaaaactaatgcctgcccgtcaggaggtgtt
ggggtctataatcctggttactggggcatgaacattgaaaaaggaaaggtttataaggtg
agcctgcatattaggtcatcagacacagtgtccttgactgtttccttgacaagctccgat
ggtctacaaaaacttgctgctcacaccatcacaggtagcaagaaaacctttgcaaaatgg
acaaagatagaatttcatttgagatccaaccaaaataacaccaactcaaggcttcaactt
acaacaagtaaaagtggggtagtttggcttgatcaagtatcagttatgccaatggacact
tacatggggcatggttttcggaaagatcttgcttctatgttggccaatctcaagcctcag
tttctcaagtttccaggcggcaactatgccatgggaaattatctacgaaatgcatttcgg
tggagtgagactgttgggccatgggaggaaagacctggtcactttaatgatgcctgggga
tactggactgatgatggacttggattttttgagttccttcagttggctgaagaccttggt
gcttccccagtttgggtggtgaatgatggagcaagccttaatgaagaagtttccacaaaa
acaattgcttcattggttaaggatgttgttaatggcatagagtttgccaggggaggaccc
aagacaacttggggttcagttcgcgcatcaatgggacacccagaatcgtttaagcttgat
tatgtttcaataggaaatcaagaatgttggatgctgtactacagaggaaattaccaaaag
ttttactctgcgattaaatctgcctacccagacatcaacattatatcaagttgtgatagg
ccaactatttcaccatccaaccctgccgatctttatgatgttcatgtctacacctctttg
actaatatgttttcaaaaactagtatgtttgacaacacaccacgtggagcaccgaaggca
attgttagtgagtacgctgtgactgggaatgatgctggcaaaggaacactggtagcagca
cttgcagaagctgcatttctcattggattggaaaggaacagtgatgtggttgagatggca
agctgtgcacccctttttgtaaatgacaatgatcgcaggtggagcccagatgccatcgtc
ttcaactcatggcagcactatgggtgtcccaactattggatgctacacttcttcaaggaa
tctagtggcgccacccttcatcctacagccatccagatctccaactatgatcagctgctt
gcgtctgccatcacttggcagaatgctaaggacaggagcacttacctcaggataaaggtg
gtcaattttggcaaccaagctgtggatctcaacatatccattgcggaactgcccactggc
atcaagaagtctggatcgaaacagatggttctaacatccagcagcccgcttgacgagaac
tccttccagcagccagagaaggtggtgccagtgttgagcccaatggtgaacgtggggcag
cagatgggcgcgtccgtggggccctactccctcacctcgtttgatctgctgctggagccg
agcaagcatgacagcatttga
DBGET
integrated database retrieval system
