Sorghum bicolor (sorghum): 8074530
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Entry
8074530 CDS
T01086
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8074530
03036 Chromosome and associated proteins [BR:
sbi03036
]
8074530
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8074530
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8074530
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8074530
microRNA pathway
RISC loading complex
8074530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
8074530
NCBI-ProteinID:
XP_021313544
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Position
3:complement(12067367..12080059)
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AA seq
893 aa
AA seq
DB search
MESSGTKDGLNKAPILQRLPMSRPHGSGTKGNQIRLRTNHFKVSVHRTDVIFYHYNVSVK
YEDDKPVESKGVSRTVIEKLQEIYLANVDFVYDGENNLYTMCALQNVEDAFMVVVEDGSS
TKTPGGNGSPEGSDTKRMKRPMTCKTYKVELKSVGEFCKEKKSVGEIPLSAIDKVLRGQE
SDDCQEALRVLDIILRQKSAKQGCLLVRQSFFHSPSEPIKLGGGVVRCPGYHSSFRPTQS
GLSLNIDVSTTMIVEPGPVINFILSNQYIKDPSRIDWGKAKHALRNLRIKTTHTNSEFKI
SSLSEKSCYEQKFLLKQRNGNGPDVVEITVYDYYLKHWDIRLQDSAIFPCLVVGKPKRPT
YLPIELCHLVSLQRYTKALTVLQRSSLVQSSRKNPRERKSDLSSALQRINYNSDDILKKC
GISIAPEFAQVDGRILQAPKLKAGDGQDLIARDGRWNFMNRKLFEAKGVHTWAAVNFTTR
WKLQDLVRRLIHCGDNKGINISPPQSIFEERLQGNESAASRVDAMLEQIRKKIEKPPTFL
LCVLPDKNSDIYGPWKRKCLVEYGIVTQCLAPKKLDDQYLTNVLLKINAKLGGLNSLLEI
ERNQAIPIVSRVPTIIFGMDVSHGAPRSNVPSIAAVVSSLGWPCISRYRASVCTLSPRVE
IIDSLFKPQGNEDRGLISELLFDFYLSSGKQRPEQVIIFRDGVSEGEFKHVLNIELAQII
EACKFLNNSGDTWLPKFTVIVAQKNHHTRFFRDGNNDTANVPAGTVVDTGICHPRYYDFY
MCAHAGRIGTTRPAHYQVLHDEIGFSPDALQELIHCLSYVYQRSTSAISVVAPVYYAHLA
AAQVRQFVRFDDASETASSASGGQASSASGGQAQPVPELPRLHKNVKSSMFFC
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagcggtaccaaggatggcctcaacaaggcgccaattcttcagagactccca
atgtcgaggcctcatgggtctggcacaaaagggaaccaaatacggcttcgtacaaaccac
ttcaaagtctcagttcacaggactgatgtcatcttctaccactacaatgtgagtgtgaag
tatgaagatgataaaccagttgaatcgaaaggggtaagtagaacagtgatcgaaaagttg
caggaaatctatctggcaaatgtggactttgtttacgacggtgaaaacaacctatacaca
atgtgtgcccttcagaatgtcgaggatgcgttcatggtagtagtggaggatggttcatct
acaaagacccctggaggaaatggaagtccagaaggaagtgacacaaaaagaatgaagcgg
cccatgacttgtaagacgtacaaagtggaattgaaatcagtgggagaattttgtaaagaa
aaaaaatcagtgggagaaatcccattgagtgccattgacaaagtcctgagaggtcaagaa
tctgatgattgtcaggaagcccttcgggttcttgacatcatacttaggcaaaagtcagcg
aaacagggttgccttctagttaggcaatccttcttccatagcccttccgagcccattaag
ttgggtggtggtgttgtgcgatgtccaggatatcattccagctttcgacccactcaatct
ggactttcactcaacatcgatgtgtctacgactatgattgtggaacctgggcctgtcatt
aattttatactgtccaaccagtatatcaaggaccctagcagaattgactggggcaaagca
aagcatgcattgaggaatttgaggatcaaaaccactcacactaactctgaattcaagatt
tccagcctgagtgagaagtcttgctatgaacagaagttcctgttgaagcaaagaaacggc
aatggacccgatgtcgtggaaataacggtctatgattactacttgaagcattgggatata
agactgcaggattctgctatttttccctgcttggttgttgggaagcccaagcgtccgaca
tatctaccgatagagctttgccatctagtgtcactgcaaaggtacacaaaggctctgact
gtactacagcggtcctcgctggtccaaagttcgcggaagaaccctagagaaaggaagtca
gatttgtctagtgcactgcaacgcattaactataattcggatgacatactgaagaagtgt
ggcatttcaatagctccagagtttgctcaagttgacggtagaatccttcaagcgccaaag
ctaaaagctggggatggtcaagatcttattgcacgtgatgggaggtggaacttcatgaac
aggaagctctttgaggccaagggagtgcacacatgggctgcagttaattttacgacaagg
tggaagcttcaggatcttgttcggaggctcattcactgtggtgacaacaagggcattaac
atttcacctcctcaatctatatttgaggagaggcttcaagggaatgaatctgcggctagt
agagtcgatgctatgttagagcagattagaaagaagatagaaaagcccccaactttcctg
ctgtgtgttctaccagataagaacagtgacatttatgggccatggaagcgaaaatgcctt
gtggaatatggtattgtgacgcaatgtttggcgcctaaaaaactcgatgatcagtacctc
acaaatgtgctgctgaagataaatgccaagcttggtgggttgaattcacttttggaaatt
gaaagaaaccaggccattcctattgtgtcgagggttcctaccattatctttggtatggat
gtttcgcatggtgcaccacggtcgaatgtaccatccattgctgcggttgttagttccttg
ggttggccttgcatctccagatacagagcttccgtgtgcactctatcacccagggtggag
attattgattccctgttcaagcctcagggaaacgaagaccgtggcctcataagtgagtta
ttatttgatttctaccttagctctggtaagcaaagaccagaacaagtcatcattttcagg
gatggagttagtgagggcgagtttaagcatgttctgaacattgagctggcacagatcatt
gaggcatgcaaatttctgaataacagtggagatacctggctccccaagttcacagtgatt
gttgcgcagaagaaccatcacacaaggtttttcagagatggcaataatgatacggctaat
gtccctgctggtactgttgtggacacgggaatctgccaccccagatactatgatttctac
atgtgtgctcacgccggcaggattgggacaacaaggccagcgcattaccaagtgctgcac
gatgagatcggcttctctcccgatgctctgcaggagctcatccactgcctctcctatgtg
taccagaggagcacctcagccatatcagtcgttgctccggtgtactacgcgcacctcgcg
gctgcgcaggtgcggcagttcgtcaggttcgatgacgcgtcagagacggcgtcgtcggcc
agtggcggccaggcgtcgtcagccagtggcggccaagcgcagccggttccggagctgcct
cggctgcataagaatgtcaagtcttccatgttcttctgctga
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