KEGG   Sorghum bicolor (sorghum): 8075105
Entry
8075105           CDS       T01086                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
  KO
K13098  RNA-binding protein FUS
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03015  mRNA surveillance pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8075105
  09122 Translation
   03015 mRNA surveillance pathway
    8075105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8075105
Spliceosome [BR:sbi03041]
 Complex A
  Other components
   Complex A specific factors
    8075105
SSDB
Motif
Pfam: RRM_1 Zn_ribbon_RanBP
Other DBs
NCBI-GeneID: 8075105
NCBI-ProteinID: XP_002457291
LinkDB
Position
3:complement(5179322..5183986)
AA seq 494 aa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NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtcagggtcttacggatccgacgactaccgcggcggcggcggtggcgggggctacggc
agcggcggatacggcggccgaggtggtggcggcggcggcggcgggcgtgggcgcggaggc
ggtggaggagggtatggaggcggcggcgggggaggaggatatggaggtggtggtggagga
ggctacggcggtggcggtggaggtggccgaggcggcggcggcggcgggttcggtggcgga
ggacgaggtggtgttggtggtggaggtggccgaggcggtggcgggcgcgggggtggacgt
gaaggcgactgggtttgccctgacgcgagttgtggcaatgtgaactttgcgaggaggact
gaatgcaataagtgtggagcaccttgcccaagtggaggaggcggcggtgggggtggaggt
tataataggtctggtggaggtggtggaggctacaaccgtggcagtggtgattatggttct
ggaggaggtggtggtttcgacagagatggtggtggtggaggtgggagcagaggaggatac
aatcgaagtggtggtggtgaccgtggttttgatgatcatcgtggtggcagaggtggcagc
tatgggggacgagatcaggaaaaccaaaggggtagtgaaggtggctacaatgccggtggc
tatggacaagctcctccgcaaggtcctccttcctatggtggtcctgcgggtgactatgca
gcgcctccgagctcctatggaggcaacaatgcttatggttcagattctgcagtgccacct
cctaatagctacagtggtggcccaggctcatacccaccaagctatggtgccccgcctcca
caccaatatggtggtgccccaggggggcaagggggtctgcctcctacatacgatggtgga
tatggtggtcggtccatgcctgggggtggaggatctggaggtgcaccgccaccttatcat
ggtggtggcggtggcagcggttatactggtagtgctgaccctgaaccagctgcaaaagtt
aagcagtgcgatgagaattgtgacgagacatgtgacaatgcgaggatttacatctcaaat
ttgcctccagatgtcactgttgaggaattacaggagctgtttggaggaataggccaggtt
ggaaggatcaagcaaaaacgtggttacaaagatcagtggccctggaacataaaaatatat
actgatgactctggaaaagccaaaggagatgcttgccttgcttatgaagatccttctgct
gctcactcagctggtggattttacaataattatgacatgagaggctacaaaatcagcgtt
gtgatggctgagaaatcagcacccagagcagcaccctcttatgggcatggcggtggccgt
ggtggtggctatggtggtggtggacgcagggatagttacagagatggtgggggccatgga
cccaatagaaaccagggtggtggttcgcgttcgcgaccatactga

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