Sorghum bicolor (sorghum): 8075105
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Entry
8075105 CDS
T01086
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8075105
09122 Translation
03015 mRNA surveillance pathway
8075105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8075105
Spliceosome [BR:
sbi03041
]
Complex A
Other components
Complex A specific factors
8075105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
8075105
NCBI-ProteinID:
XP_002457291
LinkDB
All DBs
Position
3:complement(5179322..5183986)
Genome browser
AA seq
494 aa
AA seq
DB search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NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtcttacggatccgacgactaccgcggcggcggcggtggcgggggctacggc
agcggcggatacggcggccgaggtggtggcggcggcggcggcgggcgtgggcgcggaggc
ggtggaggagggtatggaggcggcggcgggggaggaggatatggaggtggtggtggagga
ggctacggcggtggcggtggaggtggccgaggcggcggcggcggcgggttcggtggcgga
ggacgaggtggtgttggtggtggaggtggccgaggcggtggcgggcgcgggggtggacgt
gaaggcgactgggtttgccctgacgcgagttgtggcaatgtgaactttgcgaggaggact
gaatgcaataagtgtggagcaccttgcccaagtggaggaggcggcggtgggggtggaggt
tataataggtctggtggaggtggtggaggctacaaccgtggcagtggtgattatggttct
ggaggaggtggtggtttcgacagagatggtggtggtggaggtgggagcagaggaggatac
aatcgaagtggtggtggtgaccgtggttttgatgatcatcgtggtggcagaggtggcagc
tatgggggacgagatcaggaaaaccaaaggggtagtgaaggtggctacaatgccggtggc
tatggacaagctcctccgcaaggtcctccttcctatggtggtcctgcgggtgactatgca
gcgcctccgagctcctatggaggcaacaatgcttatggttcagattctgcagtgccacct
cctaatagctacagtggtggcccaggctcatacccaccaagctatggtgccccgcctcca
caccaatatggtggtgccccaggggggcaagggggtctgcctcctacatacgatggtgga
tatggtggtcggtccatgcctgggggtggaggatctggaggtgcaccgccaccttatcat
ggtggtggcggtggcagcggttatactggtagtgctgaccctgaaccagctgcaaaagtt
aagcagtgcgatgagaattgtgacgagacatgtgacaatgcgaggatttacatctcaaat
ttgcctccagatgtcactgttgaggaattacaggagctgtttggaggaataggccaggtt
ggaaggatcaagcaaaaacgtggttacaaagatcagtggccctggaacataaaaatatat
actgatgactctggaaaagccaaaggagatgcttgccttgcttatgaagatccttctgct
gctcactcagctggtggattttacaataattatgacatgagaggctacaaaatcagcgtt
gtgatggctgagaaatcagcacccagagcagcaccctcttatgggcatggcggtggccgt
ggtggtggctatggtggtggtggacgcagggatagttacagagatggtgggggccatgga
cccaatagaaaccagggtggtggttcgcgttcgcgaccatactga
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