Sorghum bicolor (sorghum): 8075125
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Entry
8075125 CDS
T01086
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2 isoform X2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8075125
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
8075125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
HemY_N
Motif
Other DBs
NCBI-GeneID:
8075125
NCBI-ProteinID:
XP_002455165
UniProt:
C5XP82
LinkDB
All DBs
Position
3:5438678..5444186
Genome browser
AA seq
908 aa
AA seq
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MPSSYAAAAAGSSSRKPNRTSNAAASTARPPAPSPSRAPAAPAVNPSVISDSDPSSYSSS
SADEADLTASDSATASVVSAYLSVAGEGADLSKVGIFLSSAARRRSPPCLICFDPIRPSD
PVWSCSSSCFAILHLPCIQSWAHQSASGAAVPCPTWGCPKCRFAYPKSETPSSYVCFCTK
TVDPAPDPWILPHSCGDVCGRRLDANLDSGCEHTCLLLCHPGPCPPCPAVVPNARCFCGA
HREPRRCAHQRYSCGRKCNKRLSCGLHRCPVDCHDGPCPPCAVQGSHKCECGETMEEKLC
FERIFQCKRECGGMLDCGKHRCERGCHGGKCGECPLRGRRTCPCGKKDYPRLECDAEAAT
CGSTCEKVLGCGRHRCPERCHRGSCDETCRLVITKACRCGGLKKEVPCYQELTCERKCQR
SRNCGRHACKRRCCARDCPPCSETCDKKLRCGNHKCLSPCHRGVCSPCPLMKTIPCACGK
TCFEVPCGTEKNQKPPKCSKKCSIPRLCRHKLECRPHKCHYGACPPCKLTCGEELSCGHT
CKERCHGPISPPNPEFTLKPTKKKMGKHIECTPGTPCPPCKEVVLVPCFGQHLGQERAMP
CCKWRPFPCENLCGNPLLCGNHYCTKSCHVLEVPLNQPEGDRIASISKANTLAEPCEQCN
LPCQRVREPRCSHPCPLPCHLSDCPSCKVLVKRPCHCGAMVHAFECVYFNNLNAKEQIKV
RTCGGPCHRKLPNCPHLCSEVCHPGICPSVDQCMKKVNIRCACNTLKQEWLCQDVLKEYR
KSGRDPKEVPKSQFGVGLLACGEDCKKKLKAPDSELHLRKSQENKSPAVEVVNVPKRRKR
RERGQEVKISKFQEVKTYVLRVLLIILLSIIVAAGLYLLWKGIFWLSDWMNEMEEQRARQ
RHPRGAML
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctcctacgccgccgccgctgccggatcctcttcccgcaagccgaatcgcacc
tccaacgctgccgcatccactgctcgcccaccagcaccctcaccgtcgcgggcacccgct
gccccggcggtgaaccctagcgtcatctccgattccgacccctcctcctactcatcttcc
tcggcggacgaggccgatctcaccgcctccgactccgcaactgcctctgttgtttccgcc
tacctctcggttgctggtgagggggccgacctctcgaaagttggcattttcctttcctcc
gccgcgcgccgccgatcgccgccgtgcctgatctgcttcgatcctatccgcccctctgac
ccagtctggtcatgctcctcctcctgctttgccatcctccacctcccctgcatccagtca
tgggctcaccagtcagcatccggcgccgccgtgccgtgcccaacctggggatgccccaag
tgccgcttcgcctaccccaagtccgagaccccatcctcctacgtctgcttctgcaccaaa
acagtagacccggctccggacccctggatcctcccccactcttgcggcgacgtctgtggc
cgccgtcttgatgccaatctcgactctggatgtgagcatacctgcctactgctgtgccac
ccagggccgtgcccgccatgcccggccgttgttcctaatgcgcggtgcttctgtggagcg
cacagggagcctcgacgctgtgcacatcagcgttactcttgtgggcgaaaatgtaacaaa
cgtcttagctgtggactccaccgctgtccagtggattgtcatgatggcccctgcccgccg
tgtgcagtgcaggggagtcacaaatgtgagtgtggagagacaatggaggagaaattgtgc
tttgaaaggattttccagtgcaagagggagtgtggtgggatgttagattgcgggaagcat
aggtgtgagagggggtgccatgggggcaagtgtggggaatgcccactccgtggtcgtcgc
acttgcccatgtgggaagaaggattatccaaggttggagtgtgatgcagaggctgccaca
tgtggatcgacatgtgagaaggtgcttgggtgtggacgacacaggtgcccagagaggtgc
catcgtggttcatgtgatgagacttgccgtcttgtgatcacaaaggcctgccgttgtggg
ggtctgaagaaggaggtgccgtgctaccaagaattgacgtgtgaaagaaaatgtcaacgt
tcgagaaactgtggtcgccatgcttgtaaacgacgctgctgtgctagggattgcccaccc
tgctccgagacttgtgataagaagctcagatgcggcaatcataaatgcctctcaccatgc
cacagaggtgtttgttcaccttgtcctctgatgaagaccattccttgcgcctgtgggaaa
acatgttttgaggttccttgtgggactgagaagaaccagaaaccacccaaatgctcaaag
aaatgcagtatacctcgcctatgccgacacaagcttgaatgccggccccacaaatgccac
tatggagcctgcccaccttgcaagctgacctgtggggaagaactttcttgtggccacacg
tgtaaagaaaggtgtcatggccctatttctcctccaaaccccgagttcacactgaaaccg
acaaaaaagaaaatgggaaagcacatagagtgtacacccgggacaccatgcccgccatgc
aaagaggtggttttggtgccatgctttgggcagcatcttggccaagaacgcgctatgcct
tgttgcaaatggaggccttttccctgtgaaaatttatgtgggaatcctctcctctgtggc
aaccattattgtacaaaatcttgccatgtgttagaagtcccattgaatcaacctgaagga
gatcgtatagcatctatcagtaaagcaaacacacttgctgagccttgtgaacaatgcaat
cttccttgtcaaagggttagggagcctcgttgttcacatccttgccctttgccatgccat
ctgagcgattgtccatcttgtaaagtccttgttaaaagaccatgccattgtggtgctatg
gtgcatgcttttgaatgtgtatattttaacaacttaaatgcaaaggaacagattaaagta
aggacgtgtggcggcccatgtcatagaaaactaccaaattgcccccatctgtgctcagaa
gtatgtcaccctggtatatgcccatcggttgatcagtgcatgaaaaaggtcaacatccgc
tgtgcatgcaacactctgaaacaagagtggctatgtcaagatgtcctcaaggaataccgt
aagtctggtcgcgatccaaaagaagtacctaaaagtcaatttggagttggcttgcttgcc
tgcggtgaagactgcaagaagaagctgaaggctccagattcagagttgcatctccggaaa
agtcaggagaacaagagccctgctgtggaagtcgtaaatgtgcccaaacgcaggaagcgg
cgtgagcgtggacaggaagttaaaatctccaaattccaggaagtcaagacttacgtgctg
agagtgctactgattattttgctgtcaataatcgttgctgctggtctgtacctgttgtgg
aaaggcatattctggctttctgactggatgaacgaaatggaagagcagagggcgagacaa
aggcatccgaggggtgcaatgttgtaa
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