Sorghum bicolor (sorghum): 8075185
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Entry
8075185 CDS
T01086
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8075185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8075185
Spliceosome [BR:
sbi03041
]
Complex B
Other components
Prp19-related factors
8075185
Complex C
8075185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
8075185
NCBI-ProteinID:
XP_002454583
UniProt:
C5XSR7
A0A921UKL5
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Position
4:complement(64402433..64404667)
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AA seq
609 aa
AA seq
DB search
MATLKDLLPAPKTSASTFYDHSSDPWFKERYGGESAQAAAAARPAAAARPVPPYGKRTGF
VPRRPEDFGDGGAFPEIHVAQYPLGMGRRDDKGGSKILALTVDAHGSVAFDAVVKQGENA
GKIVYSKHSDLVPKIATADSQATSDDDEEQKQIEETTERTKAALEKVVNVRLSAAQPKNV
PTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAVDPLEPPKFKHKRVPRASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVQMRSKVQRELMLKEKERKEQELRALAQRARMERTGAPPAPSGVPAG
GGRGAVEAVDEDMDMEQPREPREPREQRRESREEREARIERDRIREERRRERERERRLEA
KDAAMGKKSKITRDRDRDISEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQ
YNIYSKGLFTAQSTMSTLYRPKKDGDSDVYGDADEQLEKVMKTERFKPDKGFTGASERTG
KRDRPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGGGGTMKASGGSSMRDDYDGGSGR
SRINFERGR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctcaaggatctcctaccggcgcccaagacgtcggcgtccaccttctacgac
cacagcagcgacccctggttcaaggagcgctacggcggggagtcggcgcaggcggccgcg
gcagcgaggcccgcggccgccgcccgccccgtgccgccgtacggaaagcggacggggttc
gtgccgcgacggccggaggacttcggcgatggcggcgccttcccggagatccacgtcgcg
cagtacccgctcggtatgggacgccgcgatgataagggcgggtccaagatccttgcgctc
accgtggacgcgcacggcagcgtcgccttcgacgccgtcgtcaagcaaggtgagaacgca
ggcaagatcgtctactccaagcatagcgacctcgtgccgaagatagccactgccgattcc
caggcgacgtcagacgacgacgaggagcagaagcagatcgaggagaccactgaacggacc
aaggccgccttggagaaggttgtcaacgtccgcctctctgcagctcagcccaagaatgtg
ccgactcatgattctgagtccaagttcatcaagtataagccgtcccagcaatccgcggcc
ttcaattcaggtgcaaaggagaggatcattaggatgtcagagatggctgtggatcctctt
gagccaccaaagttcaagcacaagcgtgtgccccgagcatctgggtcaccacctgttcca
gtgatgcactcgccgccacggccggttacagtgaaggatcagcaggattggaagatccca
ccttgcatttcaaattggaaaaatccgaagggttacacgattccgcttgataagaggttg
gcggctgatgggagggggctgcaggaggtgcagatcaatgataattttgcaaagctttct
gaagcattgtatgtggcagagcagaaggcgagggaggcagtgcagatgcgctccaaggtt
cagagggaacttatgctgaaggagaaggagaggaaggagcaagagcttagggctcttgca
caaagggcacgtatggagaggactggtgccccgcctgcaccgtcaggtgtaccagctggt
ggcggcaggggagcagttgaggctgttgatgaagatatggatatggagcaaccacgtgaa
ccacgtgaaccgcgtgagcagcgcagggagtctagagaagagagggaagcaaggattgag
cgtgatagaatccgtgaggagcgcagacgtgagagggagagggagaggaggctggaagcc
aaggatgctgcaatgggcaagaagagtaagatcactagagacagggatcgtgatatcagt
gagaagattgctcttggtatggcaagcactggtggtgcaaaaggtggtgaggtcatgtat
gatcagcggctgttcaaccaggacaagggaatggactcaggttttgccacagatgatcag
tacaacatctattctaagggtctcttcacagctcagtccacgatgtccacactatacagg
cctaagaaggatggggattcagatgtatatggtgatgcagatgagcagttggagaaggtt
atgaagactgagaggttcaagcctgacaagggatttactggtgcttcagagaggactggc
aagcgagacaggcctgtggagttcgataagcaggaagaaaatgatccatttggtctggat
cagttcttgactgaggtgaagaagggtaagaaagctgtggagaagattggaggtggagga
accatgaaggcgagtggtgggtcctcaatgagggacgattatgatggtggatctgggagg
tcccgcattaattttgaaagggggcgctga
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