Sorghum bicolor (sorghum): 8075479
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Entry
8075479 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8075479
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8075479
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8075479
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8075479
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8075479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
8075479
NCBI-ProteinID:
XP_002455783
UniProt:
C5XN14
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All DBs
Position
3:50530243..50537391
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AA seq
477 aa
AA seq
DB search
MPTVSVKWQKEVFPGIEIDTSQPPIVFKSQLYTLTGVPPERQKIMVKGGILKDDADWSTL
GVKDGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQ
CLHSVPELKSALLSYSDTVRGNGIDQASHNLTLATRNTFGDLDQSVRPVAPLQFLQTLRK
KYPQFAQQHNNVYMQQDAEECWTQLVYTLSQTLTSDSSESAVLPMKQLFGIDLVSRVHCA
ESGEESTETESVYSLKCHISQDVNHLHEGIKHGLKTELEKASPTLGRTAVYTRESRINEL
PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYEFCSDELKQKLQAPRQMLRDAENA
KFGLKAHGKASSSKENEESSSAGESSSMDIDKAESSLPKKQLTGVYDLVAVLTHKGRSAD
SGHYVGWVKQDDGKWIEFDDDNPNIRKEEDILKLSGGGDWHMAYICLYKARMAESKS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtaagcgtgaaatggcagaaggaggtctttccaggcatagagattgacact
agccagcctcctattgttttcaagagtcagctgtacacactaactggtgtgccacctgaa
cgccaaaaaattatggtgaagggtggaatattgaaggatgatgcagattggtctactttg
ggagtgaaagacggccaaaagttgatgatgataggcacagctgatgagattgtgaaagct
ccagagaaaggtccagtgtttgttgaggatctgccagaagaagagcaagtggttgcactg
ggtcacagtgctggtctttataatcttgggaatacatgctatatgaattccacgttgcaa
tgtctgcattctgttccagagctgaagtcagcactgctaagctattcagatactgtaaga
ggtaatggcattgaccaagcttctcataatttgactcttgctactcggaatacctttggc
gatcttgatcaaagtgttcgccctgttgcacctctacaattcttgcagacactgcgtaaa
aaatacccgcaatttgcgcagcagcataataatgtctacatgcaacaggacgcagaagaa
tgctggacacagttggtgtatacactttctcaaactcttacctcagattcaagtgaatct
gcagttcttccgatgaagcaactatttgggatagatctcgtgagcagggtccactgtgca
gaaagtggtgaggagagcacggagacagaatcagtttattcccttaagtgtcatatatct
caagatgtgaaccatcttcatgagggaattaagcatggcttgaagacagaacttgagaaa
gcttcacctacactgggtcgaactgcagtttatactagagaatcaagaataaatgagctg
cctaggtacttgactgtgcagttcgttcgtttcttttggaaaagggaatcaaaccaaaag
gcaaagattttacgaaaagttgattacccactggaactggatgtttatgaattctgctct
gatgaactgaaacagaaactccaagctcctcggcagatgctgagagatgcagaaaatgca
aagttcggattgaaagcacatgggaaagctagcagctcaaaagaaaatgaggagtcaagt
agcgctggggaatcgtccagtatggacattgacaaagctgagtcttctctaccaaagaaa
caattaactggcgtctatgatttggttgctgtcttgacacacaagggaagaagtgcagac
tctggccactatgttggctgggttaagcaagatgacggaaaatggatcgagtttgatgat
gacaatccgaacattcgcaaggaggaagacattttgaaactatctggtggaggtgactgg
cacatggcttatatctgcctgtacaaagcccgcatggcggaatcaaagagttag
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