KEGG   Sorghum bicolor (sorghum): 8075544
Entry
8075544           CDS       T01086                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    8075544
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sbi01009]
    8075544
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8075544
Enzymes [BR:sbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     8075544
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     8075544
Protein phosphatases and associated proteins [BR:sbi01009]
 HAD phosphatases
  Other HAD phosphatases
   8075544
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     8075544
SSDB
Motif
Pfam: zf-PARP PNK3P
Other DBs
NCBI-GeneID: 8075544
NCBI-ProteinID: XP_021313431
LinkDB
Position
3:62170067..62179739
AA seq 667 aa
MLAVPFSCLRIARNPIRVRLLHPVSAARVTRLAMSTTPPLAAATISVEYAKSGRSTCKGC
SGAIASGALRLGASARDPRGFDATKWYHVSCLPSLSHPLGPIESIKGFDSIKDHDREELR
KLEKNHKRDNTAVSPLEEPSPKKARIQMSSPAEGVPDKVTISVEYAKSGRSTCKGCNENI
AKGALRLGASFPDPRGYENNKWYHVACFPTSSYPLFPMENLKGFDSIKDHDRDKLRKLEE
NRKSDGNVADVLNESNLKKEMAQSMEDSKEGAEKDPEGIKNHKRDKTAGSPLEEPSPKKA
RISAEGVPDKVTISVEYAKSGRSTCKGCNENIAKGALRLGASFPDPRGYENNKWYHVACF
PTSSYPLFPMENLKGFDSIEDHDRDKLRKLEENHKSGGNVADESNESNLKKEMAHNMKDS
KGGADKDLEGVKVHCMGESGEGAENNLEEAKKLPAGNRTVGPSISFSLSDIKKEYKDATL
PAHWKVFDTVIFREQEDGLHASSKIAAFDFDGCLAKTSVRRIGADQWSLQHKSIPEKLQR
LYNDGYKLVIFTNESNIERHKNKRQQAVDSKVGRLDNFIECVKAPIQVFIACGLGKGKDI
PDDPYRKPNPGMWWLMAQHFNSGIEIDMDQSFYVGDAAGREKDHSDADIKFAKAIGLKFH
VPEEYFP
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgctcgctgtccccttctcctgcctccgcattgcgcgaaaccccatccgcgtccgcctt
ctccaccccgtctccgctgctcgcgtcacccgtctcgccatgtcgaccacgccgccgctg
gcggcggctaccatatccgtcgagtatgccaagtccgggcgctcaacctgcaaggggtgc
agcggggccatcgcctcaggggcgctccgcctcggcgcctctgcgcgcgacccccgtggc
ttcgacgccaccaagtggtaccacgtctcctgcttaccctccttgtcgcacccgctcggc
cccatcgagagtatcaaggggttcgactccatcaaggaccatgatcgtgaggaattgcga
aagctagagaagaatcataaaagagacaatactgcagtcagtcctttagaggaaccaagt
ccaaagaaagcaaggattcagatgtcttcccctgcggagggggtgccagataaggtaacc
atctctgttgagtatgcgaagtctggccgctctacctgcaagggctgcaacgaaaatatt
gccaaaggtgccctccgccttggtgcctcttttcctgatccccgtggctatgaaaataac
aagtggtaccatgttgcgtgcttccctacatcgtcatacccattatttccaatggagaat
ctgaaggggtttgattcaatcaaggatcatgaccgtgacaagttgcgcaagttggaggag
aatcgcaagagcgatggaaatgtggctgatgtattgaatgagtcaaatctgaagaaagaa
atggctcagagcatggaggactcaaaagaaggtgctgaaaaggatccagaaggaataaag
aatcataaaagagacaagactgcaggcagccctttggaggaaccaagtccaaagaaagca
aggatttctgcggagggggtgccagacaaggtaaccatctctgttgagtatgcgaagtct
ggccgctctacctgcaagggctgcaacgagaatattgccaaaggggccctccgccttggt
gcctcttttcctgatccccgtggctatgaaaataacaagtggtaccatgttgcgtgcttc
cctacatcatcatacccattatttccaatggagaatctgaagggctttgattcaatcgag
gatcatgaccgtgacaagttgcgcaagttggaggagaatcacaagagtggtgggaatgtg
gctgatgaatcgaatgagtcaaatcttaagaaagaaatggctcacaacatgaaggactca
aaaggaggtgctgacaaggatctggaaggagtaaaggttcactgcatgggggagtctgga
gaaggtgctgaaaataacctggaagaagcaaagaagttacctgcagggaacaggacggtc
ggtccatcgatatccttttcactttctgatatcaagaaagaatacaaggatgctaccctt
cctgctcattggaaggtttttgatacagttatcttccgtgagcaggaagatggccttcat
gcttcatctaagattgctgcatttgattttgatggatgccttgccaagaccagtgtgagg
aggattggtgcagaccagtggtctttacagcataaatcaattccagaaaaattgcaaaga
ctgtacaatgatggttacaagctggtcatattcaccaatgagtcaaacattgagcgccat
aagaacaagcggcagcaagctgttgactccaaagttggtcgccttgataactttattgaa
tgtgttaaggcccctattcaggttttcattgcttgtggtttagggaaaggaaaagatatt
ccagatgatccataccgcaaaccaaatcctggaatgtggtggttgatggctcagcatttc
aattctggaatcgaaattgacatggatcaatctttctatgtcggtgatgctgctgggaga
gagaaggatcatagtgatgcagatataaaatttgctaaggccatcggtctcaagttccat
gttcccgaggaatacttcccgtga

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