KEGG   Sorghum bicolor (sorghum): 8075639
Entry
8075639           CDS       T01086                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03013  Nucleocytoplasmic transport
sbi03015  mRNA surveillance pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8075639
  09122 Translation
   03013 Nucleocytoplasmic transport
    8075639
   03015 mRNA surveillance pathway
    8075639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8075639
   03041 Spliceosome [BR:sbi03041]
    8075639
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     8075639
    TREX complex
     8075639
Spliceosome [BR:sbi03041]
 Complex C
  Other components
   EJC/TREX
    8075639
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    8075639
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 8075639
NCBI-ProteinID: XP_002445519
UniProt: C5YL34 A0A921QMP1
LinkDB
Position
7:complement(55216226..55221542)
AA seq 272 aa
MSYYERRGGDRGSGRIQGSGGRGGHVLRGRSGLPPRGPLGVNSRPSARTIAKSFSRTKDM
TWRPDLFSDSMAASGIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPN
GTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGSDLGLPMTPRINVVGASNGRATRT
VVMTPEFSQRGRGSSSRPLSNPSNRFNNRGGFQAGRGRGQFQARGRGRGQFQSRGRGRGQ
FQGRGRGRKPEKTADELDKDLESYHAEAMKTD
NT seq 819 nt   +upstreamnt  +downstreamnt
atgtcatattacgaaagaaggggtggagataggggtagtggccgtattcaaggaagtggt
gggcgaggtggacatgtcctgcgtggaagatcaggattgcctccccgaggacctcttggg
gttaactcccgtccatctgcacgcactattgctaagtcatttagcagaaccaaagacatg
acctggagacctgatctatttagtgatagcatggcggctagtggaatagaaactggtaca
aaattgtacatttcaaacttggactatggggtttctaatgaggatataaaggagctgttt
tcggaagttggccatttgaaacgctttgctgttcactatgatggttatggccgcccaaat
ggcactgcagaggtggtgtttacacgaaggagcgatgcaattgctgcactgaagcgttac
aataatgttctacttgatggaaaagctatgaagatagaagtcattggaagtgacttaggc
ttgcctatgacacctcgtataaatgtcgttggtgcttctaatggcagagctacaagaaca
gttgttatgacgcctgagtttagtcaacgtggcaggggttcaagcagtagacctctaagt
aatccaagcaacaggtttaacaaccgtggtggtttccaagctggtcgaggccgtggccag
ttccaggcccgtggcaggggccgtggccagttccagagccggggcaggggccgtggccag
ttccagggccgtggcagagggaggaagcctgagaagactgcagatgagttggataaagac
ctggaaagctatcacgcagaggccatgaaaaccgattga

DBGET integrated database retrieval system