Sorghum bicolor (sorghum): 8075706
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Entry
8075706 CDS
T01086
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8075706
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
8075706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
DUF1122
Motif
Other DBs
NCBI-GeneID:
8075706
NCBI-ProteinID:
XP_002452551
UniProt:
C5XYS3
A0A921R595
LinkDB
All DBs
Position
4:58466589..58471585
Genome browser
AA seq
786 aa
AA seq
DB search
MEAAAQSHPLPLLQNIDPGVRRFLDGRFRSAADLATASDVEAEIRGHCAELEASISNLYV
SLQEAAAAYSSCREVAGSALRGVRGGLSALKAYESTGAGEEMEARTEQMQFEQLPALASE
VARVEMVREYAEMALKLDSLVGDIEDAVSSSVTGKLKSPVDNSEKTHHVAIGYLKNIEDL
LASVTTTRPQWTRLLSSVDHRVDRSLAILRPQAIVDHRSLLSSLGWPPSLAGSKFSSIDS
RKQAEIVNPLFSMRGDLKSKYSESFLALCNLQELQKRRKARQLKGHDVGNQLRQPLWVIE
VLVNPISTAAQHHFSKWAEKPEFVFALAYKIIRDFVDSMDEILQPLVDKANLIGYSCREE
WISGMVIALSTYLAKEIFPKQIELLQESSNSSDAGSTAYQARVSWLSLVDLMISFDKRIQ
DLISSTGLLLTVKDDDSWQRISVLCVFCDRPDWLQVWAEIERQESLNKLQSAMDLEKNWS
TRIQGTMLEYDSDDYKSPVITSAVHQTLSLLIDRARPIPSIMLRAEFIRTSAAPIISEFL
GYMLRRSQEAEGLTALADDNAVLKVSQSINAARYFESTLTEWCEDVFFLEMENLPVNGEG
GCIFQQEINHLKEFRVEWADKISTVILRGFSARSRDYLKNKRQWLDKSEGPAVSRTFIES
LDYMQGQLSKLQGGLNTVDFVTVWRNVASGVDQLLFAGIFTSGVKISSDGVERLQSDLSV
LFAIFSAWCLRPEGFFPRLSEGLRILKIDEQQLRDGAFTDKNWLREYGIRHLTAADTEKI
IKNRVY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcagctcaatctcatccgcttccgcttctccaaaacatcgaccccggggtc
cgccgtttcctcgacggccgattccgctcggcggccgacctcgcgacggcctccgacgtt
gaggccgagatccgcgggcactgtgcggagctagaggcctccatctccaacctgtacgta
agcctacaggaagctgccgctgcgtactcatcttgccgcgaggtcgctggttcggccctc
cgtggcgtccgcggcgggcttagtgccctcaaagcatacgagtcaacaggggctggagaa
gagatggaagcgagaacggagcagatgcagttcgagcaactccctgctctggcctccgag
gtggcgagagtggagatggtcagagagtacgccgaaatggctctcaaacttgacagtttg
gtgggtgatatagaagatgccgtttcttcttctgtaactggaaaacttaaatctcctgta
gacaattcggagaaaacacatcatgttgctattggatatcttaaaaacatagaagatctt
ttagcttctgtaactacgactagaccacaatggactcgccttctatcttccgtggatcac
agagtggaccgatctttagctatactaagaccacaagccattgttgatcatcgatctctt
ctttcttcccttggctggcctccttcacttgctggctcaaaattttcgagtattgattca
aggaaacaagcagagattgtgaacccattattttcgatgcggggtgatctgaaaagcaag
tattctgagagctttcttgcactatgcaatttgcaggaattgcagaaacgtagaaaagct
agacaactgaaagggcatgatgtgggaaatcaactacgtcaaccattatgggtaattgaa
gtgctagtaaatccaatatctacagcagcacaacaccatttctcaaaatgggctgaaaag
cctgaatttgtttttgctcttgcttataagataattagagattttgttgattccatggat
gagattctacagccccttgtggataaggccaaccttattgggtatagttgtagggaggag
tggatttcaggaatggtcattgcattgtcaacatacttggcaaaagagatatttcctaag
cagattgaacttcttcaggaaagtagtaactcaagtgatgcaggcagcacagcatatcag
gctagagtctcgtggctcagccttgttgatctaatgatatcttttgacaagcggattcaa
gatttaatctcgagtactggactgctacttactgtaaaggatgatgacagttggcagagg
atctcagtcctctgtgtcttctgtgatcgcccagactggcttcaagtatgggcagagatt
gagagacaggagagtcttaataagctgcaatcagcaatggatttagagaaaaattggagc
acaaggattcaaggaacaatgcttgagtatgactcagatgattacaagtctccagtaatc
accagtgccgttcatcagaccttgtctttgctaattgatcgtgctcgtcctatccctagc
atcatgcttagggcagaatttattaggacgtctgctgcacccatcatatcggaattcctt
ggttacatgcttcggaggtctcaagaagcggaggggctaactgctctggctgatgataat
gctgtgctcaaggtgtcacagtctatcaatgcagctcgatattttgaatccacattgaca
gaatggtgtgaggatgttttctttcttgagatggaaaatttacctgtaaatggtgagggt
gggtgtatctttcagcaagaaataaatcatctgaaagagttcagagtggaatgggccgat
aagatttccactgtcattttgcgtggattcagcgctcgttctcgggattatctaaaaaat
aagaggcagtggctggacaaatcagagggacctgctgtatcaagaaccttcatagaatct
ttagactacatgcaagggcaactatctaagcttcaaggtggcctaaataccgttgatttt
gtgacggtttggagaaatgtggcaagtggggtagaccagctgcttttcgccggcattttc
acaagcggcgtaaagattagcagtgatggagtggaaaggctacagagcgacctgagcgtt
ctgtttgctattttttcagcgtggtgtctgagacctgaaggcttcttccctcgactgtcc
gagggattgaggatactgaagattgatgaacagcagctcagagatggggcgtttacagat
aagaattggctgagggaatatggcattaggcatctgacagctgctgacactgagaagata
ataaaaaatcgggtatattga
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