Sorghum bicolor (sorghum): 8075983
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Entry
8075983 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2 isoform X2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8075983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8075983
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8075983
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8075983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
8075983
NCBI-ProteinID:
XP_002440605
UniProt:
C5Z051
A0A921U3W0
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Position
9:complement(4372346..4374379)
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AA seq
342 aa
AA seq
DB search
MRRRPRPLVKRRKKMVSTFSFEEDEDSDSVEEDEDLGAADSLHAPPDVRARTSTAVANVT
VGDADALECGVCFLALRPPIFQCEVGHVVCSACRDKLEATGNGNCHVCRAATRGGYRRCY
AMERLVDCIRVPCPYAAHGCDATPPYHGQESHRQVCPHAPCHCPGDSCGFIGSETALMDH
FAGAHKWPCTTKVRAGEAFSIRLRDGFNFFLLADHDRCGDGEQAAVTCCSVPCRLFLLNV
MKERLSRAISVICIHPHTSSAAAANNGDQQLPLTQCELVFSCYGDRSSCRSHYQSSVFRV
VCTDLSSGLPNPENCFQFFVPNTVFGVGDDKNSIQIKARIIN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcggccgcggccgttggtcaagaggaggaagaaaatggtaagcactttcagc
ttcgaggaggacgaggattccgattccgtggaggaggacgaggatttgggcgccgccgac
agccttcacgcgccgccagacgtgcgtgctaggacgagcaccgcagtggcgaacgtgacg
gtgggtgatgccgacgccctcgagtgcggcgtctgtttcctcgcgctcaggcctcccatc
ttccagtgcgaggtggggcatgtggtgtgttcggcctgtcgcgacaagctggaggccacc
gggaacggcaactgccatgtctgccgcgctgccacgcgtgggggttaccgccgatgctac
gccatggagcgtctcgtggactgcatccgcgtcccctgcccatacgcggctcacggctgc
gacgcgacgcctccctaccatggccaggaaagccaccgtcaggtgtgcccgcacgcgccc
tgccactgccccggcgactcgtgcggcttcatcggctctgaaaccgcgctgatggaccac
ttcgccggtgcacacaagtggccgtgcaccaccaaggtccgcgctggggaggcgttcagc
atccgcctgcgtgacggattcaacttcttcctcctcgcggaccatgaccgctgtggcgat
ggtgagcaagcggcggtcacttgttgcagcgtcccgtgccggctgttcctgctgaacgtg
atgaaagaacggcttagccgtgccatctcggtgatctgcatccatcctcacacatcctcc
gccgccgctgccaacaacggtgatcaacagctgccgttgacgcaatgcgagctggtgttc
tcgtgctacggtgacaggagctcatgccgtagccactaccagtcgtcggtgttcagagtg
gtgtgcacggacctctccagtgggctgcccaaccctgaaaactgcttccagttcttcgtg
ccgaacaccgtttttggggttggagacgacaagaattctatccagattaaagcacgtatc
atcaactag
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