Sorghum bicolor (sorghum): 8075994
Help
Entry
8075994 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8075994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8075994
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8075994
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8075994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
8075994
NCBI-ProteinID:
XP_002440612
UniProt:
A0A1Z5R0W5
A0A921Q8L8
LinkDB
All DBs
Position
9:complement(4486799..4489415)
Genome browser
AA seq
367 aa
AA seq
DB search
MPWRRRAACVPSCVVEVEAACVMEVGGGVRDWEIVVAAVVVGGVVGREGRGDAAGTGAAA
VGEDGGEHLSAFAAVVTPSAIMASSSSSAPDLTVADEDVLECGVCFLPLKPPIFQCARGH
VLCSPCSDKLRDAGKCHLCGVAMPGGYQRCHAMERVVDSVRTPCPRAPYGCEARPLYHAL
QDHVLASCAHAPCHCPAAAAAGEPAACGFKGSIPALLDHVGGAHGWPCTTARYGAPSCSV
HLRDGFNFFVSHSHNVDEHGRRYLYLFNVVRHGFCRAASVIRVCPRVPAVKRVKLVLSFS
YPKKREGMNETLVNDQFFHEQRIEFRVACSDLSDGLPDSYQLIVSKYLLRDDDDDMVVVV
KQIFSSV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgccctggcgtcggcgtgcagcctgcgtccctagctgcgtcgtggaggtggaggcggcg
tgcgtcatggaggtgggaggcggcgttagggactgggagatcgtcgtcgcagctgtcgtc
gttggaggggtcgtgggaagggaggggaggggagatgctgcagggactggggcggcggcg
gtgggggaggatggaggggagcacctgtctgcatttgctgccgtcgtcacaccgtcggcg
ataatggcgtcgtcgtcgtcgtcggcccctgatctgacggtggcggacgaggatgtcctc
gagtgcggtgtctgcttcctcccgctgaagccacccatcttccagtgcgcccggggccat
gtgttgtgctcgccatgctccgacaagctcagggacgccggcaagtgccacctgtgcggc
gtcgccatgcccggcggctaccaacggtgccacgccatggagcgcgtggtggactcggtc
cgcaccccgtgcccgcgcgcgccctacggctgcgaggccaggcccctgtaccacgcgctc
caggaccacgtcctggcgtcgtgcgcgcacgcgccgtgccactgccctgccgccgccgct
gccggcgagccggcggcgtgcggcttcaagggctccatacctgcgctcctagaccacgtc
ggcggcgcgcacggctggccctgcacgacggcgcgctacggcgcgccgtcctgctccgtc
catctccgcgacgggttcaacttcttcgtgtcccactcccacaacgtcgacgagcatggc
aggaggtacctttacctgttcaacgtcgtccgccatggcttctgccgtgccgcgtcggtg
atccgtgtctgccctcgcgtccccgcggtgaagagagtgaagctcgtgctctcattctca
tacccaaagaagcgcgaagggatgaacgaaacccttgtcaatgatcagttcttccatgag
cagagaatagagttcagagtggcgtgctctgatctctccgatggtttgcccgacagctat
cagctcattgtgtccaaatacttgctcagagacgatgacgacgatatggtagttgtcgtt
aagcagattttcagtagtgtttga
DBGET
integrated database retrieval system
