Sorghum bicolor (sorghum): 8076023
Help
Entry
8076023 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8076023
KO
K14315
nucleoporin NDC1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8076023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8076023
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8076023
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
8076023
NCBI-ProteinID:
XP_002454467
UniProt:
A0A921UJQ5
C5Y0W8
LinkDB
All DBs
Position
4:complement(62240259..62244314)
Genome browser
AA seq
501 aa
AA seq
DB search
MDRAPPRGAPRDAVGQRWLAVFAFQAALSAAASALRLAVFPRGRSHPLLGVPTGLLLALD
PFLSCAATGLLALALLLTESPHPRPPPLPRSALATALLAAAGTLCVGAAAAMLPEDAGWE
AVAWLGFRGAVLGSIFAGHYFGRRRWLLQFPVLQRPLFYGLKMGLLPSGNRALKLSIQAF
LISHFLVFFLPWQFRKGGSVILTEISILMVTAAVSFCLEINYQFVQVVHTRRCSFAPPQS
TAAAETNPTEFILETLEQSDSRSLIQYLAYQDLCVVSECNVEPWRRAAFFEESGETYKRI
VTACLKPLEEFTSKIAEALEGLSSDKPELMLQQSKLFSAFDDSQICTWCARTLAVLTARS
RQEDRYGVAQLTGCNAAVMTTLLSALVAIETCLGKKTNPQPVHSLGPENIRWASLSTGRK
GTGVSIASTQKGGLHKKAYTMADVLRTSVYQIVSAFIDDLRANAKPSSLEKNWISEGRKP
VYGSQAVLVQKLILFIEYRAV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgccccgccgcgcggcgcgccccgcgacgctgtcggccagcggtggctcgcc
gtcttcgccttccaggccgcgctctcggccgccgcttccgcgctccgcctcgcggtgttc
ccgcgcggccgcagccacccactcctcggcgtccccaccggcctcctcctcgcgctcgac
ccgttcctctcttgcgccgccacggggctcctcgcgctcgcgctcctcctcaccgagtcc
ccgcacccgcggcctcccccgctgccccggagcgctctcgcgaccgccctcctcgccgcg
gcaggcacgctctgcgtgggcgccgcggcggcgatgctacccgaggacgccgggtgggag
gccgtcgcttggctcgggttccgaggcgccgtgcttgggtccatcttcgccgggcactat
tttggccgtcggaggtggttgctccagttccccgtcttgcagcgacctctattctatgga
ttgaagatgggtctcctaccatctggaaatagggctctaaagttatcaatccaggccttc
ctcatttcccatttcctagttttctttcttccttggcaattcagaaagggaggttctgtt
atacttactgagatcagcattttaatggtgactgctgctgtttccttctgtttggaaata
aactatcagtttgtccaggtcgtacatacaaggaggtgcagttttgctccacctcagagc
actgccgctgcagagactaaccccactgaatttatcctggaaactttggaacaaagtgat
tcacgatcattgatacaatatcttgcttaccaagatttgtgtgtggtatctgagtgtaat
gtggaaccgtggcgcagagctgctttcttcgaggaatctggtgaaacttataaaagaatt
gtgacagcttgtctgaagccacttgaggagtttacttcaaaaattgctgaagcccttgaa
ggtttatctagtgataagccagaactgatgctccaacagtccaaactctttagtgcattt
gatgattcccagatatgcacatggtgtgctcggacattggcagtattaactgcacgctca
cgccaggaggatcgatatggtgttgctcaactcactggctgcaatgctgctgtgatgaca
acgttgctgtctgccctagtagcaattgagacatgtttaggaaagaaaacaaacccacag
cctgtgcactcactgggtcctgaaaacattaggtgggctagcttgtccacaggacgaaaa
ggcactggagtttcaattgcaagcacacaaaaaggtggcctgcacaagaaagcttatacc
atggcagatgttcttcggacttctgtttatcagatagtttcagcattcattgatgacctg
cgagctaatgcaaaaccatccagcttggagaagaactggatcagtgaagggagaaagcct
gtgtatggttcacaagccgtgttggttcagaagttgattctgtttattgagtaccgtgct
gtatga
DBGET
integrated database retrieval system
