Sorghum bicolor (sorghum): 8076142
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Entry
8076142 CDS
T01086
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
sbi04156
Integrated stress response (ISR) signaling pathway
sbi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8076142
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
8076142
09140 Cellular Processes
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
8076142
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8076142
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8076142
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8076142
03041 Spliceosome [BR:
sbi03041
]
8076142
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
8076142
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
8076142
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8076142
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
8076142
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8076142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
8076142
NCBI-ProteinID:
XP_002437892
UniProt:
C5Z4V4
LinkDB
All DBs
Position
10:complement(4006606..4011405)
Genome browser
AA seq
324 aa
AA seq
DB search
MDEAAVDDLIRRLLEARGGRTPRNAQVTDADIRRLCAAAKDVFLQQPNLLELEAPIKICG
DVHGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSIETICLLLAYKLKYPENFFLLRG
NHECASINRIYGFFDECKRRFNVRIWKIFTECFNCLPVAALIDDKIFCMHGGLSPELKNM
DQIRNISRPVDVPDVGLLCDLLWSDPEKELDGWGENDRGVSYTFGADIVAEFLQKHDLDL
ICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGALMSIDDSLVCSFQILKPSEKKG
KAGTSNMSKPGTPPRKIKISVTRI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcggcggtcgacgacttgatccggcggctcctcgaggcccgcggcgggcgc
accccgcggaacgcgcaggtgaccgacgccgacatccggcgcctctgcgccgccgccaag
gatgtgttcctccaacaacccaacctcctggagctcgaggcccccatcaagatatgcggg
gatgtccatggacaatattcagatcttcttcgattatttgagtatggtggctatccacca
gacgcaaattatctgttcttgggtgactatgttgatagggggaaacagagcatagaaaca
atatgccttctgttggcgtacaagttaaagtatccagaaaacttcttcctcctcagggga
aaccatgaatgcgcctcgatcaaccggatatatgggttctttgatgagtgcaagaggaga
ttcaatgtccgtatctggaagatattcactgagtgctttaattgcctccctgtggctgcg
cttattgatgataagatcttttgcatgcatggggggttgtctcctgaacttaagaacatg
gatcagatacgtaacatttctcgtccggtggatgttcctgacgttggtctcctttgtgat
ttgctatggtcggaccccgagaaagagcttgatgggtggggtgagaatgacaggggtgtt
tcctacacatttggagctgatatagttgccgagttccttcagaaacatgatctagatttg
atctgcagggcccaccaggttgtggaggatgggtatgaattttttgcaaaccgccagctt
gtaacaatattctcagcaccaaactactgtggagagttcgacaatgctggtgcactgatg
agcattgatgactccctagtatgttcgttccagattctcaagccttcagaaaagaaagga
aaagcaggaacttccaacatgtcaaaacctggaacacctcccaggaagataaaaataagt
gttactcgaatttag
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