Sorghum bicolor (sorghum): 8076142
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Entry
8076142 CDS
T01086
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8076142
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8076142
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8076142
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8076142
03041 Spliceosome [BR:
sbi03041
]
8076142
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
8076142
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
8076142
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8076142
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
8076142
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8076142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
8076142
NCBI-ProteinID:
XP_002437892
UniProt:
C5Z4V4
A0A921TZR0
LinkDB
All DBs
Position
10:complement(4006606..4011405)
Genome browser
AA seq
324 aa
AA seq
DB search
MDEAAVDDLIRRLLEARGGRTPRNAQVTDADIRRLCAAAKDVFLQQPNLLELEAPIKICG
DVHGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSIETICLLLAYKLKYPENFFLLRG
NHECASINRIYGFFDECKRRFNVRIWKIFTECFNCLPVAALIDDKIFCMHGGLSPELKNM
DQIRNISRPVDVPDVGLLCDLLWSDPEKELDGWGENDRGVSYTFGADIVAEFLQKHDLDL
ICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGALMSIDDSLVCSFQILKPSEKKG
KAGTSNMSKPGTPPRKIKISVTRI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcggcggtcgacgacttgatccggcggctcctcgaggcccgcggcgggcgc
accccgcggaacgcgcaggtgaccgacgccgacatccggcgcctctgcgccgccgccaag
gatgtgttcctccaacaacccaacctcctggagctcgaggcccccatcaagatatgcggg
gatgtccatggacaatattcagatcttcttcgattatttgagtatggtggctatccacca
gacgcaaattatctgttcttgggtgactatgttgatagggggaaacagagcatagaaaca
atatgccttctgttggcgtacaagttaaagtatccagaaaacttcttcctcctcagggga
aaccatgaatgcgcctcgatcaaccggatatatgggttctttgatgagtgcaagaggaga
ttcaatgtccgtatctggaagatattcactgagtgctttaattgcctccctgtggctgcg
cttattgatgataagatcttttgcatgcatggggggttgtctcctgaacttaagaacatg
gatcagatacgtaacatttctcgtccggtggatgttcctgacgttggtctcctttgtgat
ttgctatggtcggaccccgagaaagagcttgatgggtggggtgagaatgacaggggtgtt
tcctacacatttggagctgatatagttgccgagttccttcagaaacatgatctagatttg
atctgcagggcccaccaggttgtggaggatgggtatgaattttttgcaaaccgccagctt
gtaacaatattctcagcaccaaactactgtggagagttcgacaatgctggtgcactgatg
agcattgatgactccctagtatgttcgttccagattctcaagccttcagaaaagaaagga
aaagcaggaacttccaacatgtcaaaacctggaacacctcccaggaagataaaaataagt
gttactcgaatttag
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