Sorghum bicolor (sorghum): 8076162
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Entry
8076162 CDS
T01086
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
8076162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8076162
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
8076162
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
8076162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
Sgf11
Motif
Other DBs
NCBI-GeneID:
8076162
NCBI-ProteinID:
XP_021305276
LinkDB
All DBs
Position
10:complement(4358748..4366642)
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AA seq
967 aa
AA seq
DB search
MLTGRESLVRLIGRRRRSALPSSLAAVLSLPSPFPSASLAQADDVGGSGEAAGAEAGSTS
GGSGVVGLGAEWVVCPVCGDSIRGSDYCVNTHLDMCLTRGTKRKLTQSTLLNFRFSKKVS
AEPTANNLNNEIETENMKQIVADLSSDQAFFASDSEIGSSKSGTTISSPTCLNGSLGTSE
TITSYTPSNIVLPNVKDAVNDGTGELPTVATSCSFDECTVMDSSTIVAVDTVIVGRRFHE
NIELREDSVITFLRDPLNAKDPDAIKVLYAASEYEEILGYLPRDLAKVLAPLMDKHYVEC
EGFVVGLHEQHFGNVPIQITIQKCKADSQRNDDTYYCQSLWENFVSTVKSENFRQPRNAR
YQINFNLMIADVIATHAHVLIDVEKTFLASFKSLSDDGQHLFVRIYTRKGPWFRKSSISY
HEISDLEHAVMELKLAGYIDMLSCTVDPSEYDIKEILDVLTVPEMKEILKELPKDNTSCT
RRHELVSTLLSSYHNGTCASLPKRILKWTGTCIRISKMADELLWRIQRLFFLNGDQDLSS
FLLVEFGVVKFPDYACSISHHIFQQRSDLLEYEDAIRVAQVMDESLDNNNMDLVTRCIDL
SENRLCTMPKQENATPPKHLPSFFSRFSASWVYSKILTLGVSVYERDRRYEDAIRILKIL
LSKVACDRRRGYWTLRLSVDLEHMGRPNESLSTAEEGAIDPWVRAGSKFALQRRVLRLSK
PPRRWKVPSYADYVKRNIREVSIEGRPLNCETGAKNVFYGYDGELCGVEQLALQYYADEG
GGWQGTHSEGDIWMTIFGLLMWDVMFSDIQDVFQSKFQTAPLDLETDDFYKSRKDIAESQ
LRKIQDGMAEEMLISSWELHQGTSCQGVNWVRYSLTDLRAVVACIGGHRLASLLRHLAVD
YRSWSSGMPDLLLWRFLDERGGGEAKLVEVKGPRDQLSEQQRAWILVLMDFGFDVEVCKV
SPVTKRR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgggcgggagagcctggtccgcctcatcggccggcgccgccgctccgctctc
ccctcctcgctcgccgcggtcctatcgttaccctcccctttcccctccgcctccctcgct
caggccgacgatgtgggcggctcgggagaagcggctggagctgaggctggttcgacgtct
ggaggaagcggcgtcgtcggcctgggcgcggagtgggtggtctgccccgtctgcggcgac
tcgatccgagggtccgactactgcgtcaacactcacctcgatatgtgccttacaagagga
accaaaaggaagttaacacagagcacccttcttaatttcagattcagtaaaaaggtttcc
gctgagcctacagcaaacaatttgaacaatgagatcgagacagaaaatatgaaacagatt
gttgcagatttgtcgagtgaccaagcattctttgcatcagatagtgagattgggagttca
aagtccggcactactatttcatcgcctacctgtctgaatggctcacttggcacttctgag
actattacgtcctacacaccttcaaatattgtcttaccaaatgtaaaggatgctgtaaat
gatggcacaggggaacttccaacagtggcaacttcttgcagttttgatgaatgcacagtt
atggattctagcaccattgtagcggttgacactgtcatagttggccggaggttccatgag
aacattgaattgagagaagattcagtcattacctttctaagagatcctctgaatgctaag
gaccctgatgctataaaggtgctttatgcagcgtctgaatatgaggagatacttggatac
ttgcctcgagatcttgctaaagttttggctcctttaatggacaaacattacgttgaatgc
gagggatttgtggttggtttgcatgaacaacactttggcaatgttcccatccagattact
atccagaaatgtaaagctgacagtcagagaaatgatgatacatattattgccagtcctta
tgggaaaatttcgttagcactgttaaaagtgaaaattttcggcaacctcgcaatgcaaga
tatcagataaattttaatttgatgatagctgatgttattgctacccatgcacatgttctt
atcgatgtagaaaaaacatttttagcttcttttaagtcattatcagatgatgggcaacat
ctttttgttaggatctacactcgaaaagggccatggttccggaagagcagcatctcatat
catgaaatatcagatctggagcatgcagtcatggagttgaagttggcaggttatattgac
atgctttcttgcactgttgatccttctgaatatgatattaaggagattcttgatgtgtta
actgttcctgaaatgaaagaaattctcaaggagcttcctaaggataacacaagctgcaca
cgtcgacatgagcttgttagcacccttctgtcttcatatcataatggtacctgtgcatca
ttaccaaagcgaatcctaaaatggactggaacctgtataagaatttctaagatggcagat
gaacttctgtggcgtatccagaggctcttttttctaaatggtgatcaagatctttcttcc
tttctattagtggagtttggtgttgtgaagtttccagactatgcctgcagtatctctcac
cacatttttcaacaaagaagtgatctacttgagtatgaagatgctattcgagttgctcag
gtgatggatgaatccctcgataataataacatggacctggtgacaagatgcatcgattta
tctgagaatcgattatgcactatgccaaaacaagaaaatgcaactccacctaaacatctc
ccatcattcttttctcgcttttcagcttcctgggtctattcaaaaatactcacattaggt
gtctctgtttatgaacgagaccgcaggtatgaagatgcaataaggattctaaagatacta
cttagtaaagttgcttgtgatagacggcgaggatattggacattgaggctatccgttgat
ttggagcatatgggtcgtccaaatgagagcctttccacagctgaagaaggagcaattgat
ccatgggtccgtgctggctcaaagttcgcgctgcaaaggagagtgctgcgtttaagcaaa
cctccacgacgctggaaagttcccagttatgctgattatgttaagagaaatataagagag
gtaagtattgaaggaaggccgttaaattgtgagacaggagcaaagaatgtattttatggt
tacgatggggaactttgtggggtagaacagttggctttacaatattatgctgatgaaggt
ggtggttggcaaggtacccattcagaaggtgacatttggatgactatctttggccttcta
atgtgggatgtaatgttttcagacatacaagacgttttccagtctaaattccagacagcc
ccccttgatctggaaacagatgatttttacaaatctaggaaggacattgcagaatctcag
ttgaggaagatacaagacggaatggctgaagagatgctaatcagctcctgggaactgcat
caggggacatcctgccaaggtgttaactgggtccgttattcgttaactgatctgcgagct
gtcgttgcatgcattggtggccatcgcttggcatcgctcctccgccatctagcggttgat
tacaggagctggtcgagtggaatgcctgatctgctgctatggcgtttccttgatgaaaga
ggtggcggtgaggctaaacttgtggaagtcaaaggaccaagggaccagctgtcagagcaa
cagcgtgcatggattcttgttctcatggattttggattcgatgtggaagtttgcaaagta
agcccggttaccaagcggagatag
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