Sorghum bicolor (sorghum): 8076464
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Entry
8076464 CDS
T01086
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbi04812
]
8076464
Cytoskeleton proteins [BR:
sbi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
8076464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
PAN2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
8076464
NCBI-ProteinID:
XP_002448776
LinkDB
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Position
6:complement(60067471..60075819)
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AA seq
920 aa
AA seq
DB search
MTTNTKRAYKLQEFVAHSSNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNSILSLSGH
TSAVESVGFDSTEVFVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFAS
GSLDTNLKIWDIRRKNCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLL
HEFKCHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSTGPETTGVRSMTFNPD
GRSLLCGLHESLKVFSWEPIRCHDTVDVGWSKLADLNVHEGKLLGCSFNQSCVGIWVVDL
TRLEPYATGTSTKLNGHSELKTVSSGTLPLQNDSGSRANIGRSSTLQTSENNLKASSGRL
SAQNSDSAPKETKLAPSSGLVPSTPQRAGVSSNNRSVGNSAFQSGGTTLKRSSLRSNSAS
NVHNFSKADVVPVIVPRTSSGGELATDSRSDAADVAPVLPKVTRRVDPATDSRKESNDVD
LVIPKASSRVEIASDSAPVSTFKSGRRLEAAPDSKKESADTTPVVPNPRANARMEMASDS
APALSKANRKLDSGTDSKKESVDAVPAIVPRANSRMEMNSDSRREPSAGRVSPFRIQSRY
AELRKLTHAKIDANKVDSGSKITETDDFNCQIFLPRRNGVFQISSEESREDVKCGPADRM
GFSNSSEPNASVRSENYVSRMRKPRDNCYIEVSRAGRARSNVSNWEGRDQSPSHEEPTTS
SSSLAPTGRPYSSRGSKQASETPIIVSDEDVLSLLMEQHDLFLSSTKSRLTKLQIIHQMW
ERNDIRGVLSAMERMGDHAVCADMASVLMEKSEIITLDLCTSILPAVTDLLESKIDRHLS
VTLELLVKLVRTFGPMIHSTVSSGPCVGVDLEAEQRRERCNLCFIELEKAKNKLPSLTRR
KGAVANAAQELALVFQEIMS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaacaccaagcgcgcctacaagctccaggagtttgtggcgcactcttccaat
gttaactgcctcaagattgggaggaagacctcgcgggttcttgtcacaggaggagaggat
cataaggtcaatctttgggctattgggaagcccaattcaatattgagtttatcagggcac
acaagtgctgtggagtcggttggttttgattccacggaagtgtttgtggctgcaggagca
gccagtggaacaataaaactatgggatttggaggaggcaaagattgtccgcactcttact
gggcatagatcaaactgtatgtcagttgatttccatccgtttggggaattctttgcctct
gggtcgttggacactaatctgaagatatgggatataagaaggaagaattgcatccataca
tacaaaggtcacacacgaggggtgaatgctattagattcacacccgatggtcggtgggtt
gtgtctggtggtgaagataatatagtaaagctctgggatctgactgctggaaagttatta
catgaattcaagtgtcatgagggtcagatccagtgcatagatttccacccccacgagttc
cttctggcaacaggttcagctgataaaactgtcaagttctgggatttggagacttttgag
ttgattggttctactggacctgagacaacaggtgttcgatccatgacattcaatcctgac
ggaagatctttgttatgtgggttgcatgaaagcttaaaggttttctcctgggagccaata
agatgccatgatactgtggatgtgggatggtctaaacttgctgatttgaatgtccacgag
ggaaaacttcttggttgttctttcaatcaaagttgtgtaggaatatgggttgttgatctg
acgcgtcttgagccatatgcaacgggtacttcaacaaaactaaatggtcattctgaattg
aagactgtgtctagcggcactttgcctttacaaaatgatagtggctcaagggctaacata
gggcgatcatcaaccttgcaaacttcagagaataacctaaaagcttcttcaggaagattg
tcggcacaaaactcagattctgcacccaaagagactaaattggcaccctcaagcgggttg
gtcccaagcacaccacaaagggctggagttagctccaataatagatctgttggaaattca
gcttttcaatctggtggtaccaccttaaagagaagttcattgcggagtaacagtgcatct
aatgtccacaatttcagtaaagctgatgtagtgccagtcattgttcccagaactagctca
ggaggggagttggctactgattctagaagtgatgctgctgatgtggcacctgttcttcct
aaggtaaccagaagggttgatcctgctactgattctagaaaagaaagtaatgatgtggat
cttgttattcctaaagcaagctcaagagtggaaatagcctctgattcagcacccgtttct
actttcaagtcaggcagaaggttggaggctgcccctgattcaaaaaaagaaagtgctgat
acaacacctgttgttcccaatcctagggcaaatgcaagaatggagatggcctctgattct
gcgcctgctctttcaaaggcaaacagaaagctagattctggtactgattcaaagaaagaa
agtgttgatgcagtacctgccattgtacccagagcaaattctagaatggaaatgaattct
gattctaggagagaaccctctgctggaagagtatcaccattcagaatccagtcaagatat
gctgagctacggaagctaacccatgccaaaattgatgcaaacaaagttgacagtggaagt
aaaattactgaaacagatgacttcaattgccaaatatttcttccccgtagaaatggtgtt
tttcaaataagttctgaagaatcccgcgaagatgtaaagtgtggtccagctgacaggatg
ggattttcaaattcgtcagaaccaaatgcaagtgtccgcagtgagaattatgtttctaga
atgcgcaaaccaagagataactgctatattgaagtttcaagagcagggagagcaaggtca
aatgtctctaattgggaagggagggatcagtcccctagtcacgaagaaccgacaacaagc
agttcttcgctggctcctacaggccgtccatattcatctagaggaagcaaacaagcttct
gaaactccaatcatagttagtgatgaagatgttctatcacttctcatggaacaacatgac
ttatttctaagctcaacaaagtctcggctgacaaaattgcagattattcatcaaatgtgg
gaaagaaatgacatcaggggtgtgctctccgcgatggagaggatgggtgatcatgctgtc
tgtgctgatatggctagtgttctgatggagaaaagtgaaataataacacttgatttatgt
acctctatcctgcctgctgtcactgatcttctggagagtaaaattgacagacacttgtcc
gtcacattggaattgttggtgaagcttgtaaggacttttggtccaatgatacattcaaca
gtatcatcaggtccttgtgttggcgtagaccttgaagcagagcaaaggagggagcgctgc
aacttatgcttcattgaattggagaaggccaaaaataagcttccgtctctaacaagaaga
aaaggggcggttgcaaatgctgcacaagagcttgctcttgtcttccaggaaatcatgagt
tga
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