Sorghum bicolor (sorghum): 8076518
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Entry
8076518 CDS
T01086
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sbi01001
]
8076518
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8076518
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
8076518
Protein kinases [BR:
sbi01001
]
Serine/threonine kinases: Other
Other
8076518
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
8076518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WDR55
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
LisH
ANAPC4_WD40
ARM_ARMC5
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
LisH_PAC1
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
8076518
NCBI-ProteinID:
XP_002448829
UniProt:
C5YB39
LinkDB
All DBs
Position
6:complement(60943582..60952906)
Genome browser
AA seq
1916 aa
AA seq
DB search
MAESGKEAAAAAAAAPEPGSGPPHEDEDALLARAHTVISRILDRELDPNPRLLHTLATMC
ELHEARYIELCAADPTFNNTNTRTTSTIGKLANLLRDNDEFYELVFCKFLSDTSYSVAVR
AAAARLLLSCQSAWTPPYPHVFEDSIIDNIKKWVTEDPEASNECEWKYLGKNKPTDAEML
RTYAIGLLAMALCSGGQLVEDVLTLGVSAKLMRFLRIRVLGDSSSSQRDANHPQDTKYPR
GRDDSRGKSRLAQDGSRLDGTRVGYGVLLTNPTAEKDNEPGVGMRQAYGERSLDDTVASL
DNSDVPEADWTNDRCYGTSVCDTKSKYGEKNSVTRLLKDEEISENGEVLKRKLGRAPSRL
RVKGKSGDNLPECEMTPLSPTSGLRIGGRPTRDRNVVRVDDPKKATDVNNRSAGLESFSA
ISKEEYEDRFRDCIIGLKDISDIVLKAVRAAEAEARSANAPDEAVKAAGDAAAELVKSAA
LEVWKSENNSDAVVVAAEKAASAVVEAAVSTSVSRSANQVGEERAVEEAVQTSEDQDLEN
FVISDKAQLLQLREKYSIQCLQILGEYVEALGPVLHEKGVDVCLTLLQRGMKDQEGRDHF
AQLPDVLKLICALAAHRKFAALFVDRGGIQKILSIPRITQTYMGLSACLFTFGSLQSTME
RVCALSSDTLDSVVELALQLLECPQDLARKNVAIFFAAAFVFKAVLDLFDARDGMQKLLD
ILCGCASGRSGSNSGGAGSSNVNQRNDRPPAEVLTASEKQVAYHTCVALRQYFRAHLLQL
VDSIRPSKSIRSIARNTSSARAGYKPFDISNEAMDAVFRQIQRDRKLGLALVRARWPVLD
KFVASNGHMTMLELCKFQAHGDRYLRDLTQYAIGVLHIITLMPQPHVRKSIVQGTLSNNR
AGMAVLLDTVKSLDYIDHEVICPALNVLVNLVCPPPSISNKPLSTANQQPAAAQALASES
RDKNFEKSILDRNLLANQGESRERSGDGNPAERNNTLHQGTPSTPVVPSGVVGDRRITLG
VGGGGPGLAAQLEQGYRQAREVVRANNGIKILLQLLGSRMVTHPVAIDSIRALACRVLLG
LARDDTIAHILTKLQVGKKLSELIRDTSAQTSGGDNGRWQAELTQVAIELIAVLTNSGKE
TTLAATDAAAPALRRIERAGIAAATPISYHSRELMQLIHEHLLGSGFTATAAMLQKEAGL
APLPLTAAVLPAHQVAALEASSVQQQWPSGRVQGFLSDKINMSTDQSAQRSDSILPSSKK
KALTFSSSFSRRALSPHPISGSRASNILKSPVPIAADIGDAEMLNKTPLSLPLKRKLVDV
KDNNSASASKRLAATDQMYQPSAFQTPAPTRKGLSVAVDSPTSFQCGRTNFNNISTDNLD
NSQGTPGALTTTALPGVNDQQSGNLERMTLDSLVVQYLKHQHRQCPAPVTTLPPLSLLHP
HVCPEPSRSLSAPANIAARMGSREISRQFSGIQIPRRDRHFIYSRFKQCRVCRDEASLLT
CMTFLGDASRVAAGNHTGELRIFDCNTANLLETQTCHQHLVTMMESTYSGGNELILTSSL
NEVKIWDAYSLSAGPLHTFDDCKAARFNHSGTSFAALSTDTAQREVQLYDVQTYTLATRL
PDNTSSSGSGRGYVQPIIHFSPSDTMLLWNGVLWDTRQPTPVHQFDQFTDYCGGGFHPAG
NEVILNSEVWDLRKFKLLRSVPSLDQTVIKFNGTGDVIYAILRRNLEDVTASINARRVRQ
PLFPAFRTIDAVTYSDIATVQIDRCVLDLATEPNDSLIGVVAMDDHQELFSSARLFEVGR
KRITDDDSDPEDAGESDDEDDDDNDDSDDDVLLAPVLEGDTDSEELSSSGDDGDEDGGDD
IPSSDDIEDDPEFIDDGGDFEGGGDLMDLLGDDEGEDDESDTMESFSSGDEEGWIM
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcggggaaggaggccgccgccgccgccgccgccgcccccgagcccgggtcc
ggcccgccgcacgaggacgaggatgcgctgctcgcccgcgcccacaccgtcatctccagg
atcctcgaccgcgagctcgaccccaacccccgcctcctccacaccctcgccaccatgtgc
gagctccacgaagccagatatattgagttatgtgcagctgacccaacgttcaataacaca
aacacaaggaccacatctacaattgggaagctggccaatttgctccgggacaatgacgag
ttttacgagttggtgttttgtaagttcttgtcagacacctcctactctgttgctgtacgt
gctgccgctgctaggctgctcctgagctgtcaatctgcctggacgcctccatatccccac
gtctttgaagactctatcatagataatattaaaaagtgggtaacggaggatcctgaagcg
tctaatgaatgtgaatggaagtatctaggaaaaaataaacccacagatgctgagatgctg
agaacatatgcgatcgggttgctcgctatggctttgtgcagcggtgggcaattggtagag
gatgtcttgactttgggggtatcagcgaagctcatgcgttttttgcgcataagagtcctt
ggggattcctcatcttctcagagagatgctaatcatccacaagacaccaagtatcctcga
ggcagagacgatagtaggggtaaatctcgtctggcccaagatggttctcgattggatgga
acaagggttgggtatggagtattattaaccaacccaacagcagagaaggacaatgagcct
ggtgttggaatgaggcaagcatatggagaaaggtcattggatgacactgttgcttcattg
gataattctgatgtccccgaggctgattggaccaatgatcggtgttatggcacaagtgtt
tgtgacacaaagtcaaaatatggggaaaaaaattctgtgacgaggcttcttaaagatgaa
gagatcagtgaaaatggcgaagtgttgaaaagaaagctgggtcgagcgccctcgcgactt
agagtgaagggaaaatcaggagacaacttgcctgaatgtgaaatgacacctttatcacca
acctctggattgagaataggaggtcggcctactagagacaggaatgtggtgagggttgat
gatccaaagaaggcaactgatgtgaacaatagatctgcaggcctcgagtcgtttagcgct
atttccaaagaagaatacgaggatcggttcagggattgcattattggtttgaaggatata
tctgacattgttttgaaggcagtgagagctgctgaggctgaggccagatcagcaaatgca
cctgatgaagctgtgaaagcagcaggtgatgctgctgccgagcttgtgaaatctgctgct
ttggaggtttggaaaagcgaaaataatagtgatgcagttgtagtagcggcagagaaagct
gcatctgctgttgttgaggctgcagtgtcaactagtgtctcacgaagtgcaaatcaagtt
ggtgaagagcgtgcagtggaagaagctgtccaaaccagtgaagaccaggatttggaaaat
tttgttatcagtgacaaagcacagctcttacaacttagagaaaaatatagcatccagtgt
ctacagattttgggagaatatgttgaagctttgggtcctgttctccatgaaaaaggtgtt
gatgtttgcctcacgttattgcaaaggggcatgaaagatcaggagggacgtgaccacttt
gctcaactccctgatgtccttaaattaatttgtgcactggctgctcatcgaaaatttgct
gcactctttgttgatcgtggtggtattcagaagatcctttctattcctagaattacccag
acatatatgggtctttctgcctgcttattcacttttgggtctcttcagtctaccatggaa
cgtgtttgtgcgctttcctctgacacacttgacagtgttgttgaattagcacttcaactt
cttgagtgcccacaagatttagctagaaaaaatgtggccatctttttcgctgctgctttt
gtgttcaaagctgttctggatctatttgatgcccgggatgggatgcaaaagcttctcgat
atcctatgtggatgtgcatctggaaggtctggcagtaattctggaggagcaggatcctcc
aatgtaaatcaaaggaatgatcgaccacctgctgaagttttaactgcatcagagaagcaa
gttgcataccatacttgtgttgctctacggcaatactttagagctcatctccttcagctt
gttgattccattcggccaagcaaaagcatccgtagtattgcccggaatacttctagtgca
agagctggctacaaaccttttgacattagcaatgaagctatggatgctgtctttcgtcag
atccagcgggacagaaagttaggccttgctcttgtgagagctcgttggcctgtgttggat
aaatttgttgcctcaaatggtcacatgactatgctggagttgtgtaagtttcaggcacat
ggtgatcggtatttgcgtgacttaactcaatatgcaattggagttcttcacatcataaca
cttatgccacagccacatgtccgcaaatcaatagtgcagggaacattaagcaacaatcgt
gctggtatggctgttttattagacacggtgaaaagtctcgactatattgatcatgaggtg
atctgtccagcactgaatgtcctcgtcaatcttgtatgcccacctccttctatcagcaac
aaaccattgtcgactgccaatcagcaacctgcagctgcgcaagcgcttgcttcagaaagc
agagataagaactttgaaaaaagtattttagataggaatctacttgcaaatcagggtgaa
tctcgtgaaagatctggtgatggcaaccctgctgaaaggaacaataccttgcatcaagga
actcctagcacacctgttgtgccatctggagtagtcggtgatcggagaataacactagga
gttggaggtggtggtcctggtcttgctgctcaattggaacaaggatatcgtcaagctcga
gaagttgtaagagccaataatggcataaaaattcttttacagcttcttggttctcggatg
gttacacatcctgtggctatagattctattcgagcccttgcctgccgtgtcctgcttggc
ctggctagagacgatacaattgcacatatactgacaaagctccaggtgggaaagaaatta
tcagaactgatccgtgataccagtgcccagacgtctgggggcgataatggaagatggcag
gctgagctgacccaagtggcaattgaactaattgcggtattgacaaattctggaaaagaa
acaacattagcggcaactgatgctgctgctccagcattgagacgcattgagcgagctggg
atagccgctgctactcctatctcctatcactcaagggaactgatgcagttgatacatgaa
catctccttgggtctggtttcactgccactgctgccatgctccagaaggaggctggcctt
gcacctttaccattgacagcagcagtgcttcctgcccaccaagttgctgccctggaagca
tcatctgttcagcaacagtggccctctggacgtgttcagggatttctctcagataaaata
aatatgtcgacagatcaatctgcccagagatcagattctatcctgccttcatctaagaaa
aaggcactgaccttctcatccagtttctcacgaagagctctgtctccgcatcctatttct
ggtagcagagcaagcaacatccttaaaagtcctgtacctattgcggctgatattggagat
gcagaaatgttgaataaaacaccactgtcgctgccacttaagaggaagcttgtggatgtg
aaggataataattccgcatcagcatcgaagcgcctcgcagcaactgatcaaatgtaccaa
ccatctgcattccaaactcctgctcccactcgcaaaggtctgtcggttgcagtagattct
cctacttcatttcaatgtggtcggacaaacttcaacaatatttctactgacaacttggac
aattctcaaggcacaccaggagcattgaccactacagcacttcctggtgtgaatgatcaa
caatcaggaaatttggagcgtatgacacttgactcactggttgtacaatacttgaaacat
caacaccgtcagtgtcctgctccagttacaactttgccaccactctctcttttgcaccct
catgtttgccctgagcctagtcgcagccttagtgcacctgcaaacatagctgctcgtatg
ggaagccgtgagataagtaggcaatttagtgggatacagatacctcgtagggatcgtcat
tttatatacagtaggttcaagcagtgtcgtgtttgtcgtgatgaggcatcactgttgact
tgcatgacatttcttggagatgcatctcgagttgcagctggtaaccacacaggtgaatta
aggatatttgactgcaacacggcaaatctcctagagactcaaacgtgccaccaacatctt
gttacaatgatggagtcgacatattctggtggaaatgagctgattctcacatccagccta
aatgaggttaagatctgggatgcctactcgctatcagcagggcctttgcacacatttgat
gactgcaaagctgctaggtttaaccactctggaacttcatttgctgccctttctactgat
acagctcaacgggaggttcagttgtatgatgtacagacatatacccttgctacacggctt
cctgataacactagcagttcaggttcaggccggggttacgtacaacccattatacatttc
agtccttcagacacaatgttgctttggaatggagtgctgtgggatacgaggcaaccaact
cctgttcatcagtttgaccagttcacagattactgtggtggtggattccatccagcagga
aatgaggtgatcttaaattcggaggtgtgggatctgaggaagtttaagcttttgaggagt
gttccttccctggaccagacagtaataaagttcaatggaactggtgatgttatctatgcc
atcctgaggcgtaatcttgaggacgtgacagcatccatcaatgctcgtagggtcaggcaa
cctcttttccctgcattccgcacgattgatgcggtgacttactcagatattgcaaccgtc
caaatcgaccgctgtgtacttgatcttgccactgagcccaatgattctcttattggggtg
gttgctatggacgatcaccaggagcttttctcttctgctcgtttgttcgaagttggcagg
aagcggataactgatgatgattcagatccagaggacgcaggtgaatctgatgatgaggac
gatgatgacaatgatgactctgatgatgatgttcttcttgcgccagtgctggaaggggat
acagattctgaagagttaagcagcagtggcgatgatggtgatgaagatggtggcgacgat
atccccagttcggatgacattgaagatgacccagagttcattgatgatggcggtgacttt
gaagggggaggggacttgatggatcttttgggtgacgatgaaggggaggacgacgagagt
gatacgatggaatcctttagcagtggcgacgaggagggttggatcatgtag
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integrated database retrieval system
