KEGG   Sorghum bicolor (sorghum): 8076737
Entry
8076737           CDS       T01086                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8076737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8076737
   03041 Spliceosome [BR:sbi03041]
    8076737
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     8076737
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     8076737
Spliceosome [BR:sbi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    8076737
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 8076737
NCBI-ProteinID: XP_002437175
UniProt: A0A921Q601 C5Z4R7
LinkDB
Position
10:50269395..50277681
AA seq 414 aa
MAGYGEENQNAMNGYEEEEEEEEVEEVEEVYEEEEEEGDGDGEGEGEADEGAAAAEAAAM
AAETRSVVGDRGLAEAAGNVDAGGEDGRDADSGGGDSSGKIFVGGVAWETTEETFTKHFQ
KYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDAHVIDGRTVEVKRTVPKEEMS
SKDGPKTKKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESED
AVERVMSEGRMHDLGGKQVEIKKAEPKKPGGGDSSSNGRHSRGGGHRDSYRGSGGGSGVS
GNSSGGGYGYGGGYRSTAAAYYGSTAYGAYGRGYGYGGTAAGYGSGYGSAYGGSMYGGPY
GAYGAYGGAYGGGAYGAPGGYGAGGYDSYGGAGGMGGGGSAGGRGSSRYHPYGK
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcggggtacggggaggagaaccagaacgccatgaacgggtacgaggaggaagaggag
gaagaagaggttgaagaggtcgaggaggtgtacgaagaggaggaggaggagggggacggg
gatggggagggggagggggaagcggacgagggggctgcggccgccgaggcagcggcgatg
gcggccgagacgagaagcgtcgttggagaccggggcctagcggaggccgctgggaatgtt
gacgctggtggcgaggatgggagagatgcagattctgggggtggtgattcgtcggggaag
attttcgtagggggtgtagcctgggagacaaccgaagaaacattcacaaagcattttcag
aagtatggagctataactgattctgtgatcatgaaggacaagcatactaggatgcctcgt
ggatttggatttgttacattttccgatccatctgtgcttgacagggttctagaggatgcc
catgtcatagatggaagaacagttgaagtcaaaaggactgtcccaaaagaggaaatgtcg
tcgaaagatggacctaagacaaaaaagatctttgtgggtggtatcccatcatctcttacc
gaagataaattaaaggagcacttctcatcatatgggaaggtggttgagcatcagattatg
cttgaccatagcactggacgctcgcgtggctttggatttgtcacatttgaaagtgaggat
gctgttgaaagggttatgtcagaggggagaatgcatgatcttggagggaaacaggttgaa
attaagaaagctgaaccaaagaaacctggcgggggtgattcaagctcaaacggaagacac
agtcgtggtggtggtcaccgtgattcataccgtggtagtggtggtggcagtggtgtttct
gggaacagcagtggtggtggctatggatacggtggtggctaccgatcaactgctgcagca
tactatggcagcacagcatatggtgcatacggcagagggtatggatatggcggtactgct
gctggctatggctcaggttatggctctgcatatggtggctccatgtatggaggtccttat
ggtgcctacggggcatatggtggtgcctatggaggtggtgcatatggtgctccaggaggt
tatggtgcgggaggatatgacagctatggtggggctggaggcatgggtggtggtggcagc
gccggtggtcggggctccagcagataccacccttatggaaaatga

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