KEGG   Sorghum bicolor (sorghum): 8076844
Entry
8076844           CDS       T01086                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03018  RNA degradation
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8076844
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8076844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8076844
   03041 Spliceosome [BR:sbi03041]
    8076844
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8076844
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     8076844
Spliceosome [BR:sbi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    8076844
SSDB
Motif
Pfam: LSM DUF7452
Other DBs
NCBI-GeneID: 8076844
NCBI-ProteinID: XP_002441037
UniProt: C5YXH0
LinkDB
Position
9:complement(47755613..47757828)
AA seq 88 aa
MSQNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEG
RRITKLDQILLNGNNIAILVPGGSPPDV
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtctcagaacaacccgtcccagctcctcccctcagagctgatcgaccggtgcatcggg
tccaagatctgggtgatcatgaagggggacaaggagctcgttggcaccctctgcggcttt
gatgtctacgtcaatatggtgctggaggacgtcactgagtatgaatacactgctgaaggg
cgccgcattacaaaactcgaccagatcctcctgaacggcaacaacatagccattttggtt
cctggtggttcaccacctgatgtgtaa

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