Sorghum bicolor (sorghum): 8076863
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Entry
8076863 CDS
T01086
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00500
Starch and sucrose metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8076863
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
8076863
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-GeneID:
8076863
NCBI-ProteinID:
XP_002441051
UniProt:
C5YXK3
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All DBs
Position
9:complement(48110341..48113235)
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AA seq
800 aa
AA seq
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MASSSLPAPPAPPSSSWRGLTPRRPTPRRGPLLLARAAARSCRYRFRTDDDGVVDVAVAG
KDGDAGYAVAVEAPAHGRRSGGLVLRPAGSGEGVSLAPAAPGGALAAELSYDGARAPFHV
SFTLADATGAEIRTHRGTSFRVPVGVGRGCPSPLGLSRSKDGAANFAVYSKSAKGMVLCL
FGGGDEPALEIELDPYVHRTGDVWHVSMESVEGYASYGFRSGLFAMFGIDRPLLDPYAKV
IGDFVPADSVNEDGLAVPAVRCLASLKNAPSYDWGRDKHPCLPLEKLVVYRANVALFTKD
KSSGLADDVAGTFSGMAAKVKHFRHLGVNAVLLEPVFPYHQVKGPYFPYHFFSPMSLYSS
ECSSVSAIKSMKDMVKTMHRNGIEVLLEVVFTHTAEGGAECQMISLRGIDGSSYYIADGI
AGCKASVLNCNHPVTQKLILDSLRHWVLDFHVDGFCFINAPFLVRGPGGEGLSRPPLLEA
IAFDPVLSKTKIIADPWSPLDISNVQFPFPHWKRWAEMNTRFSMDVRKFLKGEALISDLA
TRLCGSGDLFSSRGPAFSFNYVSRNSGLTLVDLVSFSSDELGSEFSWNCGEEGPSENNAV
LQTRLRQIRNLLFILFISLGIPVLNMGDECGHSAVGSTSYKDRGPLNWKALKTTFVKEVT
GFISFLSALRSRRADIFQRREFLKFENIHWYGSDLSEPRWEDPTSNFLCMHINAELDEKL
PDSTGGDLYICFNANEESASATLPAIAEGSMWLRLVDTSLAFPGFFSRGSNPEIHKVLGF
SSYQVNAHSCVLFESKRVLS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccctcccggcgccgccggccccgccctcttcctcctggcgcgggctc
acgccccgccgccctacgcctcgccgcggccccctcctcctcgcccgcgcggcggcgcgc
tcttgccgctaccgcttccggaccgacgacgacggcgtggtggacgtggccgtcgccggg
aaagacggcgatgcggggtacgcggtcgctgtagaggccccggcccatggacggcggagc
ggcggtctggtgctccgtcccgccggctccggcgagggcgtctctctggcccctgccgcg
ccgggaggcgcgctcgcggctgagctgtcctacgacggggcccgcgcgccgttccacgtc
tcgttcacgctggccgacgcgacgggagcggagatacggacgcaccgcgggacgagcttc
cgcgtgcctgtgggcgtcggacggggctgcccctcgccgctcggcctgtcccggtccaag
gacggggccgctaacttcgcggtttacagcaagagcgccaagggcatggtgctctgcctg
ttcggcggcggggacgagcccgcgctggagatcgagctcgacccgtatgtccaccggaca
ggcgatgtctggcacgtctcgatggagagcgtggagggatacgccagctacggcttccgc
agcgggctgttcgccatgtttggcattgaccgtccgctgctcgacccgtacgccaaggtg
atcggggacttcgtccctgccgactctgttaatgaggatgggctagcggtgccggccgtc
aggtgcctcgcgtccttgaagaatgcacccagctacgattggggcagggacaagcatccg
tgcttgccattggagaagctggtggtctaccgggcaaatgtagctttgttcaccaaggac
aagtcgagtggactagcagacgatgtcgccggtactttctctggcatggctgcgaaggtg
aaacacttcaggcatcttggtgtcaatgcagttttgctggagccagtgtttccataccac
caagtgaagggaccatatttcccgtaccatttcttttcacctatgagcttgtatagcagt
gaatgctccagtgtttcagctatcaagtctatgaaggatatggtcaaaacaatgcacaga
aatggaatagaggttctcttggaggttgttttcacgcatactgctgaaggaggagcagag
tgtcagatgatatcgctccgaggcattgatggttcctcgtactacattgctgacggaatt
gctggatgcaaggcaagtgtgttgaattgcaaccatccggtgactcagaagctgattttg
gacagcctccgccattgggtgctcgacttccatgttgatgggttctgcttcatcaatgcc
cctttccttgtcagaggtccaggtggtgagggcctttcacggcctccacttcttgaagcc
atagcatttgaccctgttctttcaaagactaagatcattgcagatccttggtctccactt
gacatatctaatgtgcaatttccattccctcattggaaaagatgggctgagatgaacaca
agattctctatggatgtgcgcaagtttcttaagggagaagcacttatcagtgatcttgct
acacgtttgtgtggcagcggggatttattttcctcaaggggcccagcgttttcgttcaat
tatgtatccaggaattctggactcactcttgttgatctggtgagcttcagcagtgatgag
cttggttctgagttcagttggaattgtggtgaagaaggaccatcagagaacaatgcagtc
ctccaaacgaggctaaggcagatacgcaatttattatttattctatttatttcccttggt
atccctgttcttaacatgggagatgaatgtggacactctgctgttggttcaacatcatac
aaggatagagggcctctgaactggaaagccctgaagaccacttttgttaaggaagtcaca
gggtttatttcatttctatctgcactaaggagtcgacgagcggacattttccagagaaga
gaatttctaaaatttgaaaatatacattggtatgggagtgatttatctgaaccacgttgg
gaggatcctactagcaactttctttgtatgcacataaatgcggagctggacgagaagcta
ccagattcaactggaggtgatttgtatatctgtttcaatgcaaacgaggagtcagcaagt
gctactttaccagctattgcagaaggatccatgtggttgcgcttggttgatacatcactt
gcatttccaggtttcttttcaagagggtctaatcctgaaatacacaaagtgctaggattt
tcctcatatcaagtaaacgcacatagttgtgttttgtttgaatcgaagagggttctttcc
tag
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