Sorghum bicolor (sorghum): 8076875
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Entry
8076875 CDS
T01086
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03020
RNA polymerase
sbi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8076875
09124 Replication and repair
03420 Nucleotide excision repair
8076875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8076875
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8076875
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8076875
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
8076875
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8076875
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
8076875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
8076875
NCBI-ProteinID:
XP_002441063
UniProt:
C5XMS5
A0A921RAQ5
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All DBs
Position
9:complement(48376452..48378861)
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AA seq
177 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR
EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAAV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccacatcgtgctggagcggaacatgcagctgcacccgcggcacttcgggccg
cacctccgcgacaagctcgtctccaagctcatcaaggatgtcgagggcacctgcagtggg
cggcacgggttcgttgtggcgatcacgggtgtggaggacatcggcaaggggctcatccga
gaaggcacgggatacgtcaccttccccgtcaagtaccagtgcgtcgtcttcagacccttc
aagggcgaaatcctcgaggctgtcgtcaccatggtgaacaagatgggtttctttgcggag
gctgggccggtgcagatctttgtgtccaaccatttgattccagatgatatggagttccaa
tcgggagatgtgccaaactacacaacttctgatggatcggtgaaaattcaaaaagagagt
gaggtgcggctgaagattattggtactcgtgtcgatgctacagagattttttgcattggt
acaataaaggatgactttctgggtgttatcagcgatcctggtgcagctgtgtaa
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integrated database retrieval system
