Sorghum bicolor (sorghum): 8076904
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Entry
8076904 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8076904
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8076904
Enzymes [BR:
sbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
8076904
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
8076904
Ribosome biogenesis [BR:
sbi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
8076904
23S rRNA modification factors
8076904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_24
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
8076904
NCBI-ProteinID:
XP_021316512
LinkDB
All DBs
Position
5:11489505..11492930
Genome browser
AA seq
356 aa
AA seq
DB search
MQSPLLSLLFCRAPSLSARCLSRAATRRPPTPCPALRRSLPSPSSRPWPATSTHHQCTTM
PFTGSVPGFIVRLVGVRPSCCPPSRAFAAVRAQKIQLPKKKRRLDEVCLERFQQYSRTYI
QSWILQGKVIVDGRVVNKAGTQVSDKSVIEIKAEIPKYVCRAGHKLEAAIKGFDIDCEGK
IALDSGLSTGGFTDCLLQHGASHVYGVDVGYGQVAEKIRTHERVSVIERTNLRYLSQLPE
PVDLVTLDLSFISILLVMPAVIKVMKPDSILITLIKPQFEARRSQVGGGGIVRDPLVHKE
VLDRIISGVEEFGFCNKGWIESPIKGAEGNKEFLACFHRIPISESQPDVEAKEPVT
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgccacttctcagccttttgttctgccgcgcacccagcttgagcgcgcgctgt
ctctctcgtgcggcaactcggcgtccgccgacgccctgcccagcccttcgtcggtcgctt
cccagcccttcgtcgcgtccttggccggcgacgagcacgcaccaccagtgtaccaccatg
ccctttactgggtccgtccctggtttcatagttaggctggttggggttcggccaagctgc
tgtcctccttcccgtgcatttgcggctgtcagagctcaaaagattcagcttcccaagaaa
aaaaggcgattggatgaagtgtgcttagaaaggtttcaacaatacagtagaacatacatc
cagtcatggattcttcaaggtaaagtcattgtggatggaagagttgtgaataaagctgga
acacaagtatctgacaagtctgtcatcgaaatcaaggctgaaatcccaaaatatgtatgt
agagcaggacataagcttgaggcagctatcaaaggatttgatattgattgtgagggaaag
atagcccttgattcaggattatctacaggtggctttactgactgcttacttcagcatgga
gcatcacatgtttatggtgtagatgttggctatggacaggtggctgaaaaaattcgcaca
catgaacgtgtttcagtgatcgaacgcacaaatttaagatatctatctcaactgccagaa
ccggttgatttggtgacactggacctatcatttatctccattctcttggtcatgcctgct
gttatcaaagtaatgaagccggattctatattgataacacttatcaagcctcaatttgaa
gcacgtagatcacaggtaggaggtggagggattgttcgagatcctctggttcataaagag
gtactggatagaataatttcaggcgtggaagaatttggattctgcaataagggttggatc
gaatctcctataaagggtgcagaagggaataaggagttccttgcttgctttcacaggatc
ccaatatcagaatcacagccagatgtagaggcaaaggaacctgtaacatag
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