KEGG   Sorghum bicolor (sorghum): 8077090
Entry
8077090           CDS       T01086                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8077090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8077090
Spliceosome [BR:sbi03041]
 Complex C
  Other components
   Step II factors
    8077090
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_SCAP
Other DBs
NCBI-GeneID: 8077090
NCBI-ProteinID: XP_002467736
UniProt: A0A921V0M0 C5WXK8
LinkDB
Position
1:complement(63570332..63573654)
AA seq 572 aa
MDLLQSSYAPDGASSPEDSAAASSPDSSPLRLPSKSAAPAVDDTALALSSAASAARPLDP
SLHLVAFNPTADQLWAPILGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYAADPSGLHIVGDAQTQAPEPDTVYNLAPSEHKRRRLLAKADNQEEPAPPEAKNPAS
EEWILHNKQSPWAGKKEAPPAELTDEQKQYAEAHAAKKAEKEARGEGKSERTEVVVKTTF
HGKEEKDYQGRSWITPPKDAKATNDHCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLSA
SMDCKIKIWDVLGSRTCMRTYMGHSKAVRDISFSNDGSKFLSAGYDRNIQYWDTETGQVI
STFSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIALHPNSNWLAAQSLDNQILI
YSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLK
CHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggatctgctccagtcctcttacgcgccggacggcgcctcgtctccggaggactcggcg
gccgcgtcctcgccggattcctcgccgctccgccttccgtccaagtcggcggcccccgcc
gtcgacgacacggcgctcgcgctctcctccgctgcgtccgccgcccgcccgctcgaccct
tcgctccacctcgtcgccttcaaccccaccgccgaccagctctgggctcccatcctcggg
ccccagcacccccacgccccaatctcctccgcctccggcaaccgcaaccacaagcttggc
cacgttgaggacgccgcggtcctgccattcctattcgacgagcagtacaacaccttccac
cggttcggctacgccgccgacccctctggtctccacatcgtcggcgacgcccagacccag
gcgcccgagcccgacacagtctacaacctcgccccctccgagcacaagcgccgccgcctc
ctggccaaggcggacaaccaggaggagcccgcacccccggaggctaagaaccccgcctcc
gaggaatggatccttcacaacaagcagagtccctgggctgggaagaaggaagcgcctcct
gcggagctcaccgacgagcagaagcagtatgcggaggcacacgctgcgaagaaggccgag
aaggaggcccgcggcgaagggaagagcgagaggacagaggttgtggtcaagaccaccttc
cacgggaaggaggagaaggattaccagggacgctcctggatcacgccgcccaaggatgcc
aaggctaccaacgaccactgctacatccccaagaggtgtgtgcacgagtgggtcggccac
accaagggggtctcagccatcaggtttttcccgaagtatggacatttgctgctgtctgcg
agtatggattgcaagattaagatctgggatgttcttgggtcaaggacatgtatgcgtact
tatatggggcactcaaaggcggtaagggatatatcattctccaatgatgggagtaaattc
ttgagtgctgggtatgacaggaatatacagtactgggatactgaaacagggcaggtgatc
tcgaccttctcaactgggaaggtcccatatgttgtgaagctcaatcctgatgaggataag
cagcatattctccttgctggaatgagcgataagaagattgtgcaatgggatatgaagtca
gggcagattacacaagagtatgatcagcatttaggggctgtgaacaccataacttttgtg
gataacaacaggagatttgtgacctcgagtgatgacaagtctcttcgcgtgtgggagttt
ggcatccctgtggtgattaagtatatcagtgagccacacatgcactcaatgccatcaatt
gcattgcatcccaactccaattggctggcagcgcagagtttggacaatcagatactgata
tacagcaccaaggagaggtttcagcttaataagaagaagagatttgctggccatattgtg
gcaggttatgcttgtcaggtgaacttctcacctgatgggaggtttgtgatgtctggtgat
ggtgagggtagctgctggttctgggactggaaaagctgcaggagatttaagactttaaag
tgccacaacggagtttgcattggatgtgagtggcatccattggaaactagcaaggttgca
acctgtggatgggatggtgtaattaaatactgggactga

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