Sorghum bicolor (sorghum): 8077285
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Entry
8077285 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 17 isoform X1
KO
K27629
cyclic nucleotide gated channel 17
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8077285
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8077285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8077285
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8077285
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
8077285
NCBI-ProteinID:
XP_002436621
UniProt:
A0A921U028
C5Z5V7
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All DBs
Position
10:5496860..5501382
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AA seq
680 aa
AA seq
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MRFGSGRVEDEMALTRQRTVRFHDERPKATIPIHQKQHGLAVSRLGLGSSGKNKVFVAGD
DLWYNKIIDPSSDFILIWIYVFRVSCFIALFMDPLYFYVPEIDYKQTNHCVRKDTRLAII
VTVFRSIVDLFYVIQMIIKFRTAYLNPSSNLGVFGRGDLITDPKEIAKQYLRSDFAVDLV
ASLPLPQIIVWSVIPAIKYSSSEHGNDMLLLVALFQYILRLYLIFSLNDKIVKITGVFAK
TAWQGAAYNLLLYMIASHVLGALWYLLSVDRQVACWKSFCNETDCHTRYLYCDVKPDSSW
NGTVVFSSCDAKNTTKFDFGMFEPLLSNKTPNESFLKKYIYCLWWGLQNLSCYGQTLSVS
TFIGETLYAILLAVVGLVLFAHLIGKVQTYLQSITARVEEWRLKQRDTEEWMRHRQLPHD
LRERVRRFVHYKWLATRGVDEESILNALPTDLCRDIKRHLCLDLVRRVPFFSQMDDQLLD
AICERLVSSLSTEGTYIVREGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKPGDFCG
EELLGWALVPKPTVNLPLSTRTVRAIVEVEAFALQADDLKFVASQFRRLHSRKLQHTFRY
YSHHWRTWAACFIQHAWRRQKRRKMAKDLSMRESFSSMRSFEGDNSPEQNQALRRGASII
RELPKFRKPSEPDFSAEHDD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcggctccgggagggtggaggacgagatggcgctcacgaggcagaggactgtg
agattccatgatgagaggccaaaggcaaccatacccattcaccagaagcagcatgggctg
gctgttagcaggctcggtttgggaagttcagggaaaaacaaggtctttgtggcaggagat
gacttgtggtacaacaagattattgacccgtcaagtgacttcatcttgatatggatatac
gtcttccgtgtctcatgcttcattgctctgttcatggaccctctgtatttctatgtgcct
gaaatcgattacaagcaaaccaatcattgtgtcaggaaggatacacgcctagccatcatc
gttactgtattccgatcaattgtcgacctcttttatgtcatccagatgataattaagttc
aggactgcataccttaatccaagctcaaacttaggggtctttggtcgaggagatctcatc
acagatcctaaggaaatcgcaaagcagtacttgagatctgactttgcagttgatttggtg
gcttctttgcctttaccacagatcattgtttggtctgtgataccagctatcaaatattct
tcgtctgagcatggcaatgacatgctgcttctggttgcccttttccagtatatcctaaga
ttatacctcatcttttccttgaatgataaaatagtcaaaattactggagtttttgcaaag
actgcttggcaaggagctgcatacaatctgctgttatacatgattgctagccatgtttta
ggagcgctgtggtaccttctatctgttgatcgccaggtcgcatgctggaaaagtttttgc
aatgaaactgattgccacactcggtatctgtattgtgatgtaaaaccagattcaagttgg
aatgggaccgtagtcttttctagttgtgatgctaagaacactaccaaatttgactttggt
atgttcgagccattgttatcaaacaaaactcctaatgagagcttcctgaagaagtatatc
tattgcctttggtggggcttgcagaatctaagttgctatggccagacattgagtgtgagc
acctttattggtgagacactgtatgctatactcttggcagtggttggtctagtcttgttt
gcgcatctgattggaaaagttcagacctacctgcaatcaatcaccgctagggttgaggag
tggaggctaaaacagagagatactgaggagtggatgagacataggcaactgccccatgac
ctacgggaaagagtgagaagatttgttcattacaagtggctcgcaactcgaggtgtggac
gaagaatctatattgaatgccctacctacagatctttgccgtgacatcaagcgacacctt
tgcctggatctcgttcgtagggtcccatttttctcccagatggacgatcaacttctagac
gccatatgtgagcgtcttgtatcttccttgagcacagagggcacatatattgtccgtgaa
ggcgatccagtgactgagatgctgttcatcattcgtggtaaactggaaagctccaccaca
gatggtggacggacaggtttcttcaattcaatcaccctcaaacctggtgatttctgtggc
gaagagctcctcggatgggctctcgttcccaagcctaccgtcaacctgccattatccaca
cggacagtgagggcgattgtcgaagttgaggcatttgctctccaagctgatgatctcaag
ttcgtcgccagccaattcaggcgcctccacagcaggaagctgcagcacacgttccgatac
tactctcaccactggaggacctgggccgcgtgcttcatccagcatgcttggcgccgccag
aaaaggaggaagatggccaaggacctgagtatgagggagtcgttctcctccatgagatca
ttcgaaggcgacaactcccctgaacagaatcaagcacttaggagaggagccagcatcatc
agagagctacctaagttcaggaaaccatcggagccggatttctcagcagagcatgatgac
tga
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