Sorghum bicolor (sorghum): 8077348
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Entry
8077348 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8077348
04121 Ubiquitin system [BR:
sbi04121
]
8077348
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8077348
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8077348
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8077348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Rad50_zn_hook
zf-C3HC4_3
zf-RING_5
zf-RING-like
zf-Nse
Zn_ribbon_6
Prok-RING_1
zf-RING_Vps41
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
8077348
NCBI-ProteinID:
XP_021305433
LinkDB
All DBs
Position
10:complement(6901563..6902716)
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AA seq
293 aa
AA seq
DB search
MSTGAAGGVRRRRRTWRLYWCYVCGRAVRAVSYPTSDVFCPRCFGRFLHEIDLPAPRPVV
PPADQFFQPPFLPHDGPRRWDEDDYDVDAPPPLPPPPVGWDEFFIGANLDALIERLTQDD
RPGPAPAPESAIESLPTVQVSPANLSDGSQCPVCKEEFELGEAARELPCKHAYHTDCIVP
WLRLHNSCPVCRQELPQQPADGAQDDGGREEGSGEMETETEAPPGPVVMAGWGPLAWLPL
SRGPDGDGRVRNEANDGDGDGDADAAGGGSCAPAILQSFVVVAACFVVLSFFV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgggcgcggcgggcggcgtgcgacggcgccggcggacgtggcgcctgtactgg
tgctacgtgtgcggccgcgcggtgcgcgccgtctcgtacccgacctcggacgtcttctgc
ccgcgctgcttcggccgcttcctgcacgagatcgacctgccagcgccgcggcccgtggtc
ccgccggccgaccagttcttccagccgccgttcctcccgcacgacggtccccgccgctgg
gacgaggacgactacgacgtcgacgcgccaccgccattgccaccacctcccgttggctgg
gacgagttcttcatcggggctaacctggacgctctcatcgagcggctcacgcaggacgac
cgccctgggccggcgccggcgccggagtcagccatcgagtcgctccccacggtgcaggtc
tccccggcgaacctgtcggacggctcgcagtgccccgtgtgcaaggaggagttcgagctc
ggggaggccgcgagggagctgccgtgcaagcacgcgtaccacacggactgcatcgtgccg
tggctccggctccacaattcgtgcccggtctgccgacaggagctgccgcagcagccggcg
gacggggcacaggatgacggcggacgcgaagaaggaagtggcgagatggagacggagacg
gaggcgccgccggggccggtggtgatggctggatggggtcccctggcttggctgccattg
tcacgcgggccggacggggacggtcgggtgaggaatgaagcgaatgacggtgacggtgac
ggtgacgctgacgccgccggcggtggttcttgtgcaccggctatccttcagtcttttgtc
gtcgtcgctgcttgctttgtcgtcctctcgttcttcgtttga
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