Sorghum bicolor (sorghum): 8077357
Help
Entry
8077357 CDS
T01086
Name
(RefSeq) flowering time control protein FY
KO
K15542
polyadenylation factor subunit 2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8077357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8077357
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
8077357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_RFWD3
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
WD_LRWD1
NCAB1
WDR54
WD40_like
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
8077357
NCBI-ProteinID:
XP_002459106
UniProt:
C5XHW5
LinkDB
All DBs
Position
3:complement(73053385..73060302)
Genome browser
AA seq
714 aa
AA seq
DB search
MMQQQQQQLPPPPQHPPPQAGGGGGDFYRGPPMRQLSAASSTNLPPDYAAHPGPPPQQQH
QPPYDAYGDSFGAKRMRKPVQRRTVDYTSSIVRHVQARMWQRDARDRFTLQPTPAAVLDM
LPSVAYPDNPSTSFAAKFVHSSINKNRCSINRVLWTTTGRRLITGSQSGEFTLWNGQSFN
FEMILQAHDLPVRSMVWSHNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHGESVRGLSFS
RTDLKFCSCSDDRTVKVWDFARCQEEKSLTGHGWDVKTVDWHPTKSLLVSGGKDYLVKLW
DAKSGRELSSFHGHKNIVHCVKWNQNGNWVLTASKDQIIKLYDIRSMKELQSFRGHTKDV
TALAWHPFHEEYFVSGSFDGAIFHWLVGHEAPQVEISNAHDSSVWDLSWHPVGYLLCSGG
NDHATKFWCRNRPGDLTRDRYNSGQMQGYGDQQPFGARGMGGFQMPEPPITPGPFAPGLS
RTEGTIPGIGVAMTLAGQSLDGSDGEQRPSIPGLPPGQPPLPPGPHPSLLGQQQQYQQMP
QQQHPQFSRPPPTNMPQLQPPAHMLSHSQGSRPTLPQLPPMGGPSVPSQVNPPLPPMPHP
TAMQGSQSQMMPQMPQHMMGLNQMHPGSVPPGTVPPMGGFPSGMGNIQGASGSSGIQNFP
MGGMYNRPQGQMAPQGQMTSIPGLSSYQGMGNVGLTPPPPPPQHPPPRGGSAHQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagcagcaacaacagctgccacctccgccgcagcacccgccgccccaggct
ggcggcggcggtggggacttctaccgcggcccgccgatgcggcagctgtccgcggcgtct
tccaccaatctcccgcctgactacgccgcacacccgggccccccgccacagcagcagcat
cagcctccttacgacgcttatggtgacagttttggtgctaaaaggatgcggaagcctgtc
cagcgacgaacagtggactacacaagcagtattgtccgtcatgttcaggctcgcatgtgg
cagcgggacgctagggatagattcacattgcagccaactccagctgctgtcctggatatg
ttaccgtctgttgcatatccagacaatccctccacaagttttgctgccaaatttgtacat
tcatcaatcaataagaaccggtgctctattaatcgtgttttgtggaccactacaggccgt
cgacttatcactggatcacaaagtggtgaatttacgctatggaatgggcaatcttttaac
tttgaaatgatccttcaggctcatgatctacctgtgagatcaatggtttggagtcacaat
gaaaactggatggtgacaggcgatgatggtggtgcaatcaagtattggcaaagtaacatg
aacaatgtcaaagtgaataaaacagctcatggagaatcggttcgtggtttaagtttctcc
agaaccgacttgaagttctgctcctgctccgatgacagaaccgtgaaggtttgggacttc
gcaagatgccaagaggaaaaatcattaactggccacggttgggatgttaaaactgttgat
tggcatcctacaaagtctttactggtttcaggtggcaaagactatcttgtgaaactttgg
gatgcaaaaagtggcagagagctgagctcattccatggtcataaaaatattgtgcattgt
gtgaagtggaatcagaatgggaactgggtactgactgcctcaaaggatcagattattaag
ctgtatgatattagatccatgaaagagctgcaatccttccgtgggcacactaaggacgtc
actgcattggcgtggcatccatttcatgaagagtattttgttagtgggagctttgatgga
gctatatttcattggttggtcggccatgaagctccacaggttgaaataagtaacgcacat
gacagtagtgtctgggatctttcgtggcatcctgttggctatctactttgcagtgggggc
aatgatcatgctacaaagttctggtgtagaaacaggccgggtgatcttacccgcgataga
tacaacagtggccagatgcaaggttatggtgaccaacaaccttttggtgctcgtggaatg
ggtggattccagatgcctgaacctccaataacgcctggaccatttgctcctggattgtca
cgcactgaaggtacaatccctggcattggggttgcaatgaccttggcaggccagtctctt
gatggatctgatggagagcagaggccatctattccgggtcttccacctgggcaaccccca
ctgccaccaggtcctcatccatcacttcttgggcagcagcaacagtatcaacagatgcct
cagcagcaacatccccagttttctcggccaccacctacaaacatgccccaactgcagcca
ccagctcacatgctttcacattcacaaggatctcggcctactcttccccagcttccacca
atgggtggaccatcagtgccatcacaagtgaacccaccgcttccgcctatgcctcaccca
acggcaatgcaaggttcacagagtcagatgatgccccaaatgccacagcacatgatgggc
ctaaatcagatgcatcctggttctgtgcctcctggtactgtacccccaatgggtgggttc
ccaagtgggatgggaaacatccaaggagcatcaggttcgtctggcatacaaaattttcct
atgggtggcatgtataatcgacctcagggacaaatggctccacaaggacaaatgacatcc
attcccggtctaagctcttaccagggaatgggcaatgttggcctcacaccgcccccgccg
ccaccacagcatccgccgcctcgaggaggctcggcacaccagtga
DBGET
integrated database retrieval system
