Sorghum bicolor (sorghum): 8077413
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Entry
8077413 CDS
T01086
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
8077413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8077413
Membrane trafficking [BR:
sbi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
8077413
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
DUF6891
Motif
Other DBs
NCBI-GeneID:
8077413
NCBI-ProteinID:
XP_002459156
UniProt:
C5XJ85
A0A921RIX3
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All DBs
Position
3:complement(73827858..73832128)
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AA seq
206 aa
AA seq
DB search
MKITALLVLKSPGDSSASGGGEQQAVVLANASDVSHFGYFQRAAAREFILFVARTVALRT
PAGSRQNVQHEEYTVHCYNKDGLCAIAFTDAHYPVRSAFSLLNIVLEQYQKTFGESWRTT
KTDVTQPWQYLDDALTKYQDPAEADKLLKIQRDLDETKIILHKTIDSMLDRGERLDSLVE
KSSDLSISSQMFYKQAKKTNSCCTIL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcgttgctggtgctcaaatcccctggcgattcctccgcctccggcggc
ggggagcagcaggctgtggtgctggccaacgcgtcggacgtcagccacttcggctacttc
cagcgcgccgccgcccgcgagttcatcctcttcgtcgcccgcaccgtcgccctccgcacc
cccgccggcagccgccagaacgtccagcacgaagagtacacggtgcattgctacaacaag
gatggcctttgcgccatcgccttcaccgacgcccactatcccgtcaggagcgccttctcc
ctcctcaacatcgtgctggaacagtaccagaagacttttggagagtcatggaggacaacc
aaaactgatgtgacccaaccttggcaatacttggatgatgccctaaccaaataccaggat
cctgcagaagctgacaagctgttgaaaattcagagggacttggatgaaaccaagattatt
ttgcataaaaccattgatagcatgcttgatagaggtgaaaggttggacagcctagtggag
aagagttctgatctaagtatttcttcacagatgttctacaagcaggcgaagaaaaccaac
tcttgctgtaccatcctgtaa
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