Sorghum bicolor (sorghum): 8077505
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Entry
8077505 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8077505 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8077505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8077505
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8077505
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8077505
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
8077505
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
8077505
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
8077505
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
8077505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_N
DUF5702
Motif
Other DBs
NCBI-GeneID:
8077505
NCBI-ProteinID:
XP_021310461
LinkDB
All DBs
Position
2:77221322..77227904
Genome browser
AA seq
854 aa
AA seq
DB search
MAGVPPPPRQLEVRRFAAARAGELRSLYAAVSSRLDDAGGRQQPRSARRRTTGHLPNKRR
RRGPGEVGTEDDGGLPPRKQSRRVRRRRELAGNPAEGFSVAGDGARRLRTHLWYAKRFSM
ERRWGFILPVGTQGSGRGSRNVLKQLKNGTTILDAGYFIPIELDGPEDALLSILRMVLRP
SPSEKTPDLKHLQDQVMRGVCYENAMLWDVRSLHSQIVGPVTYMWRPFARADDKSGIEGD
PCPSHCIHDESGSSSRRQLWIWIHPAALDEGISAIRFACERQIQDSGGVVKCCSLEGKIA
RLEVNGCKAMQSLKKIFHPTNASKINMISTSDISTSTDTPLDSSTVPHLLKASVIDNAET
LQPGAILSMVVHDPREVSVKGIDSSQLVSLGKQSKDLGEDVAPDANEASSEVANILPLMW
MHPGKHDIFLSDCRELWDSRQSINPPVSDEVLCKEKHCERIKFFCLDSRNDQGQTTQEKD
NLIRSCPVILLKHAREGMPALGWSIILPLSWVKPFWLFLVSHGARAIGLRERRWIASKFR
MPCFPYDYPDSKAYASYASKEAADFDKVSERCPVAKRPPRVPVPPLWHCIMTSFHKDDVI
LGFPEVDDLVRANMILPKSLSVHSKSGDAEPLQANVASLQLHVPRTAQMLRQYVEEFDMK
YLISSSDMNVDSDQPNLASNDTVKMPRLVSELCLTRVLIRAFKEGSFEEGAVVCAPLPSD
LSAWKIRSKEEEEECVEKWELQLPHSHVSSYFSWFDPSTSSLQLPTDDAARVAFRWPIGF
VTSGFIHGSNGQDAVAVAFCEAKLLAVLRRQQWAHESLQSREICVLVRNARSGAYRRALA
TIVLEHQESDLEFL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtgccgccgccgccgcggcagctcgaggtgcggcgcttcgcggccgcccgc
gccggcgagctccgctcgctctacgcagccgtgtcgtcccgactcgacgacgccggcggt
cggcagcagccccgttccgcgcgccgccgcaccacagggcacctccctaacaagcgccgc
cgccggggacccggagaggtcggtaccgaggacgacgggggcctcccgccgcggaaacag
tcgaggagggtgaggcggcggcgggagctcgccggcaaccccgcggaggggttctcggtc
gccggcgacggcgcgaggcggctgcgcacgcacctgtggtatgcgaaaaggttctccatg
gagaggcggtggggattcatcttgcctgtcggcacacaggggagtgggaggggctcaagg
aatgttctcaagcaactgaaaaatggcacgactatccttgatgctggctacttcattcca
attgagctagatggtccagaggatgccctgttatccattctcagaatggttctgcgccca
tctccttcagaaaaaacacctgatttgaagcatctacaagatcaagttatgcgaggtgtt
tgctatgagaatgctatgctttgggatgttaggagtctgcattctcaaattgttggacca
gtaacgtatatgtggcgtccattcgcaagagcagatgacaaatctgggattgaaggagat
ccgtgcccttctcactgcattcacgacgaaagcggcagttcctcacgacgccagttgtgg
atatggattcatcctgctgcactcgatgaaggaattagtgcaataagatttgcatgtgag
agacagattcaagattctggtggtgtggtcaaatgttgctcattagagggaaaaatcgca
agattggaagtcaatggatgcaaggctatgcaatctcttaagaagatttttcatccaacg
aatgcaagtaagatcaacatgatatcaacaagtgatatctccacatcaactgatactccc
ctggattcctctactgtccctcatcttttgaaagcttctgtcattgataatgctgagact
cttcagcctggtgctatactatccatggtagttcatgaccccagggaggtttcagttaag
ggaatagattcttctcaattggtctcccttggcaagcagagcaaagatttgggggaagat
gtagccccagatgctaatgaggcatcatcagaggttgcaaatatattgccattgatgtgg
atgcaccctgggaagcatgatatattcctttctgactgtagggaactgtgggactccagg
caaagcataaatcctcctgtgtcagatgaggttctttgtaaggagaagcactgtgaacgt
attaagtttttctgcttggattcacgaaatgatcaagggcaaacaacccaagagaaggat
aacctcattcgatcctgcccggttattcttttgaaacatgccagagagggaatgcctgct
ctagggtggtccatcattctacctttgagttgggtgaaacctttctggctctttctagta
tctcatggtgcccgtgcaattggcttaagggagagacggtggattgcatcaaagttcaga
atgccatgctttccttatgattatccagacagcaaagcgtatgcatcgtatgcgtccaaa
gaagctgctgattttgataaagtatctgagcgctgccctgttgccaagagacctccaaga
gttcctgtgcctcctttatggcattgtatcatgacttcttttcataaagatgatgtcata
ttgggttttcctgaagtagacgacttagtgcgcgctaatatgatattacccaaaagctta
tctgtacattccaaatctggagatgcagaaccattgcaagcaaatgttgcatccttgcaa
cttcatgtgccaagaaccgcccaaatgttgagacaatatgtggaagaatttgatatgaaa
tatctgatttcatcatctgacatgaacgtggattctgatcaacccaacttagcttctaat
gacactgtcaaaatgccacgattggtgagtgaattatgccttacaagggttctgatccga
gctttcaaggaaggttcttttgaagagggtgctgttgtttgtgccccgcttccttcagat
ctttcagcttggaaaatcagatcaaaggaagaagaggaagaatgcgtagaaaaatgggaa
ctccagcttcctcattcccatgttagttcttatttctcctggtttgatcctagcaccagc
agccttcagttgcctacagatgacgccgcacgggtggcattcaggtggccgataggcttt
gtcaccagtggcttcatccacggaagtaacgggcaagacgcagtcgcggtcgcattctgc
gaggcaaagcttctggcagtactgaggcgacagcaatgggcgcatgaaagcttgcagagc
cgggagatctgcgtcctcgtcaggaacgcaagatcaggtgcgtaccgacgagcgctggcc
actatcgtcctggagcatcaggaatcagacctggagtttctgtag
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