Sorghum bicolor (sorghum): 8077534
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Entry
8077534 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8077534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8077534
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8077534
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GFIT
Motif
Pfam:
Ion_trans
UBM
Motif
Other DBs
NCBI-GeneID:
8077534
NCBI-ProteinID:
XP_021308036
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Position
2:complement(101325..113784)
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AA seq
503 aa
AA seq
DB search
MAGFIHRHILPPFRRPPLPFFRPAPGSALPAGRRPWTPRRILDPGDDAVLRWYRLFLVTC
LVGLFVDPLYFYLLHTDGLAACVSMDMGIGVLVTAVRTFADLFYLAHMILKFRIAFVAPS
SRIFGRGELVRDPDQIAIRYLKNDFIIDLAAMLPIPQMIIWFVIPAVSTSSANHSTNNTL
SMIVLIQYIPRVYLIISLNSKIVKASGVVTRTAWAGAAYNLLLYTLASHVLGALWYLLSV
ERQYSCWKEVCTNENGTTAEMPRCFMSFLDCKSRENPIRQTWHNHSAIQKQCMLPDAEYD
YGLFADALNLDRNGVGFIDKYLYCLWWGFRNLSSYGQNLQNSTYKGETVFCILICIMGLV
FFSHLIGNMQTYLQSMTVRLEEWRVKRRDIEEWMRHRQLPPELQERVRRFFQYKWLATRG
VDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSLSTKDAYIV
REGDPVSDMLFIIRGELERSLEV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttcatccaccgccacattctcccgccgttccgccggccgccgctgccattc
ttccgcccggcgcccggatcggcgttgcccgcgggccgccggccatggacgccccggcgc
atcctggaccctggcgacgacgccgtgctccggtggtaccgcctcttcctggtgacctgc
ctggtggggctgttcgtggacccgctctacttctacctgctgcacacggatgggctggcg
gcgtgcgtgtccatggacatgggcatcggcgtgctggtgactgcagtgcgcaccttcgcc
gacctcttctacctggcgcacatgatcctcaagttccgcatcgccttcgtggcgcccagc
tcccgcatcttcggccgtggcgagctggtgcgggaccccgaccagatcgccattcggtac
ctcaagaacgacttcatcatcgacctcgccgccatgctcccgatcccgcagatgatcatc
tggtttgttatacccgctgtgagtacatcctccgccaatcacagcaccaacaacacgctc
tccatgatcgtcttgatccagtacataccaagagtgtatcttataatatccttgaactcc
aagattgtcaaggcaagtggagtggtcacaagaacggcatgggcgggggccgcctacaac
ctgcttctttacacactggcaagccatgttcttggtgctctgtggtatctgctgtccgtt
gagcgccagtactcgtgctggaaggaggtatgcacaaacgagaacggcaccacagcggag
atgcctaggtgtttcatgagctttctggactgcaaaagcagggagaatcccatacgccag
acttggcataaccacagcgcgattcagaagcagtgcatgcttccggacgccgaatatgac
tacggattgtttgctgatgcgctcaatctggatcgcaacggggtcggcttcatcgataag
tacctctactgcctctggtgggggtttcggaacctgagctcctatggacagaacttgcag
aacagcacctacaagggcgagaccgtcttctgcattctcatctgcatcatgggcctcgtc
ttcttttcccacctcatcggcaacatgcagacctacctgcagtccatgacggtgaggctg
gaggagtggcgggtcaagcgccgggacatcgaggagtggatgcgccaccgccagctgccg
ccggagctccaggagcgcgtgcgccgcttcttccagtacaagtggctcgccacgcgcggc
gtcgacgaggagtccatcctccagtcgctgccgctggatctccggcgcgagatccagcgc
cacctctgcctggccctcgtccgccgcgtgcccttcttctcgcagatggacgagcagctg
ctggacgccatctgcgagcgcctcgtgtcgtctctcagcaccaaggacgcctacatcgtg
cgggagggcgaccccgtcagcgacatgctcttcatcatccgtggcgagctggagaggtcc
ctcgaggtgtga
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