KEGG   Sorghum bicolor (sorghum): 8077546
Entry
8077546           CDS       T01086                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sbi03009]
    8077546
   04121 Ubiquitin system [BR:sbi04121]
    8077546
Ribosome biogenesis [BR:sbi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    8077546
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     8077546
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IFT140_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_WDR19_1st PROPPIN VID27
Other DBs
NCBI-GeneID: 8077546
NCBI-ProteinID: XP_002457045
UniProt: C5XJI5 A0A921R9Z2
LinkDB
Position
3:complement(310772..317892)
AA seq 452 aa
MRVKVISRSTDEFTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFAKPFIG
AMNGHIDAVSCMAKNPNHLKAIFSGSMDGDIRLWDIAARKTVCQFPGHQGAVRGLTTSTE
GDLLVSCGVDCTVRLWKVPMLKMVDTSDHNGDNSQPSAVYTWKHAFWGADHQWDGNLFAT
VGAQVDIWDPDRSEPINSFEWGKDTVLSVRFDPGDCNILITSGSDRSLTLYDLRMSSPAR
KLIMKTRCNSVCWNPREPMNFTAANEDTNCYSFDARRLDEAKIVHKGHVSAVMDIDYSPT
GREFVTGSYDRTVRIFNYLGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK
SKASEQLGVLLPRERKKQEYQDALKERYKHLPEVKRIVRHRHLPKPIYKAANLRRTMIEA
ENRKEERRRKHSAPGSMPVQPFRKRRIIKEVE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgagggtgaaggtgatttcgcgctccaccgacgagttcacgcgtgagcgcagccaggac
ctgcagaaagtattccgcaactatgatccagcgcttcgtagtcaagagaaagctgttgaa
tacactcgggcacttaatgctgcaaagttagagaagatatttgctaagccatttatcgga
gctatgaatgggcatattgatgcggtatcgtgcatggcaaaaaaccccaatcatttgaaa
gcgatattttccggttcgatggatggagatattcgcctttgggatattgctgcgaggaag
acagtttgccagttccctggacaccagggtgctgtaagaggtttaacaacatccacggag
ggtgatcttcttgtatcatgtggcgttgactgcactgttcggctctggaaagttccgatg
cttaaaatggtggacaccagcgaccataatggagataattcccagccatcagcagtctac
acctggaagcatgcattctggggtgctgaccaccagtgggatggtaatctttttgcaact
gttggtgcccaagttgatatatgggatcctgacaggtcagagccaataaatagctttgag
tggggtaaagatacagttctttctgtgcgctttgatcctggagattgtaatattttgatt
acatcgggcagtgatcggagtctaacactctatgacctgcgcatgtcatctccagctaga
aaactaataatgaagacaaggtgcaattcagtatgctggaaccccagagagcccatgaac
ttcactgctgcaaatgaagacacaaactgttattcgtttgatgctagaaggctggacgaa
gccaaaattgttcacaaaggacatgtttcagcagtgatggatattgactactctccaaca
gggcgtgaatttgttactggttcctatgatagaacagtaaggatttttaattatcttgga
gatcacagcagagagatttaccacaccaagaggatgcaaagggtgttttgtgtgaagtac
acctacgacgggacctatctagtctctggcagtgatgatacaaatcttcggctgtggaaa
tccaaagcttcggaacaacttggagtacttcttccacgggagcgcaaaaagcaagagtac
caggatgctttgaaggagcgatacaagcatctcccagaagtgaagcggattgtaaggcat
agacacctgccgaagccaatctacaaggcagccaacctacggcgcacgatgattgaagct
gaaaaccgcaaagaggaaagaaggcgaaagcacagcgctccggggagcatgcctgtgcag
cccttcaggaagcgaagaatcatcaaagaagttgagtag

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