KEGG   Sorghum bicolor (sorghum): 8077679
Entry
8077679           CDS       T01086                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03018  RNA degradation
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8077679
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8077679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8077679
   03041 Spliceosome [BR:sbi03041]
    8077679
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8077679
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     8077679
Spliceosome [BR:sbi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    8077679
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 8077679
NCBI-ProteinID: XP_002448604
UniProt: A0A921QUW3 C5YGR1
LinkDB
Position
6:complement(57457672..57460100)
AA seq 98 aa
MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL
SGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLADGA
NT seq 297 nt   +upstreamnt  +downstreamnt
atggctgggcgcaaggagaccgctctcgacttggcgaagttcgtcgacaagggcgtccag
gtgaagctcaccggcggccgccaagttacaggaactctaaagggatatgaccagcttctc
aacttagtgctagatgaagcagttgagtctgaaagagagcaagatgatccattgaagcta
tcagggaaaaccagacagcttggcctcattgtgtgcagaggcacggcagtcatgctggtc
tcaccgaccgatggaactgatgagatcgccaaccctttccttgcggacggagcataa

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