Sorghum bicolor (sorghum): 8077684
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Entry
8077684 CDS
T01086
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8077684
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
8077684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
8077684
NCBI-ProteinID:
XP_002452600
UniProt:
C5XZB6
A0A921R802
LinkDB
All DBs
Position
4:59559735..59572633
Genome browser
AA seq
1613 aa
AA seq
DB search
MDGGHGTRQPMSPAISASAVLPQQRQMQLHHHPARPAIADLFTLYLGMNSKQRAEDPLRE
SPNKLQKRVTALNRDLPPRDEQFISDYEQLRMPFPDAEQLQAVTESVLISFVLQCSSHAP
QSEFLLFATRCLCARGHLRWDSLLPSLLNTVSSIEAPMVQGVSVTGGGPATPSSAITMPN
APNFHPSNPASPLSVMNTIGSPTQSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRR
GAEASYLHHLSCRIILAGLEFNLKPATHAVIFQHMVNWLVNWDQRPHGMDEADAMQTCRL
EKPLHEWMHLCLDVIWILVNEDKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRD
MVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLA
NSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIG
EAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQI
LRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDANNIGPQSILLDF
ISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFTNLDERATGMF
WVLSFTMAQPACEAVMNWFTSAGMADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINL
CLKLAFQLEETIFLGQAVPSIAMVETYVRLLLIAPHSLFRPHFTTLTQRSPSILSKSGVS
LLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLK
DFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTW
SEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSH
SFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQFEVQ
RQHLAQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYALRLVISLLEKPELQQR
VKNFCNTRSPEHWLKNQHPKRAELQKALGSHLSWKDRYPPFFDDIAARLLPVIPLIIYRL
IENDATDIADRVLAFYSSLLAFHPLRFTFVRDILAYFYGHLPIKLIGRILNLLGVSTKTP
FSESFAKYLVSSNSSVCPPPEYFANLLLNLVNNVIPPLSSKSKSNPADTTRSTFNKHHAS
SQPGGVGNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVPAAQIVSSLVQIIAHVQAM
LIQSNSGQGMSGGLGQSSGLPTSPSGAAESSGPNQANSAASGINATNFVSRSGYSCQQLS
VLMIQACGLLLAQLPPEFHMQLYSEAARVIKDCWWLADSSRPVKELDSAVGYALLDPTWA
SQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPR
LAFARPLFMKTLALLFNVLGDVFGKNPPVSNPNPVEASEIADIIDFLHHAVMYEGQGGPV
QSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPASSIYAATHPKLVQSSS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggacatgggacgaggcaaccgatgtctccagcgatctcggcctcggctgtg
ctgcctcagcagcggcagatgcagctccaccaccacccggcgcggccggcaatcgccgat
ctcttcaccctatacctcggcatgaactcgaagcagcgtgcggaagacccactgagagag
agcccgaacaagctgcagaagagagtgactgctctgaacagagacctgcctccccgtgat
gagcagttcatttcagattatgagcagttgcgcatgccgttccctgacgcagagcagttg
caggcagtcacagaatcagttctcatctcctttgtgctgcagtgcagtagccacgcacca
caatctgagttcttgctctttgctacacggtgcctatgtgctcgaggccaccttagatgg
gatagcctccttccatctctgcttaatactgtttcctccatagaggcacctatggtgcaa
ggagtttctgtgactggtggtggtcctgcaaccccttcgtcagctattacaatgccaaat
gctccaaactttcacccgtcaaatccagcctcacctttgtcagtaatgaacaccatagga
tctcctactcagtctggtattgaccaacctgtaggtgcaaatgtgtcaccaattaaggca
gctgaattctccagctctgcgcagcttggtactgcagcaagaggcgaccagtctcgcagg
ggagcagaagctagctatctgcatcatctgtcctgcaggataattctagcagggctggag
ttcaatttgaagccagctacccatgctgtgattttccagcatatggtaaattggctagtt
aactgggaccagaggccccacggcatggatgaagctgacgcaatgcaaacttgcaggcta
gaaaaacctttgcatgaatggatgcatctatgcttggatgttatatggattttagttaat
gaagataaatgtcgcattccattttatgagcttgtgcgctgcaacttgcagtttcttgaa
aacattcctgatgatgaagcactagttagtataattatggagattcataggaggagagac
atggtgtgtatgcacatgcaaatgttggatcaacaccttcattgtccgacatttggaact
catcgtttcttatcacaatcatacccaagcatagctggagaatctgttactaatctgcgt
tattctcccattacttaccctagtgtattgggagagccactacatggagaggatcttgca
aactccattcctaagggtggtttagactgggaacgtgctcttcgttgcttgaggcatgct
ctccgcacaaccccatcaccagactggtggagacgtgttcttcttgttgccccttgctac
agatcacagtctcagcaatcatcaactcctggagctgttttctcacctgatatgattggt
gaggcagttgctgacaggacaattgaactactgaggctcactaactcagaaactcaatgc
tggcaagattggcttttgtttgctgacatctttttcttcctaatgaaaagtggatgcatt
gactttcttgattttgtggacaagcttgcttctcgagtaacaaatagtgatcaacagatt
ctccggagtaatcatgtcacttggttgcttgcacagattatccgcattgagattgtgatg
aacactcttagttcagacccaaggaaggttgagaccacaagaaagataatttcattccac
aaagaagacaaaagccttgacgccaataatattggccctcaaagtattcttcttgatttc
attagtagcagtcagactctgcgcatttggtctttcaacacttcgattagagaacatttg
aacagtgatcagcttcagaaaggaaaacagattgacgaatggtggaaacagatgacgaaa
gcttctggtgagaggatgatagactttacgaacttggatgaacgagcaacgggcatgttc
tgggttctctccttcaccatggcacaaccagcttgcgaagcagtaatgaattggtttacg
tcagctggaatggcagatttaattcaagggcctaacatgcagccaagtgaaagaataatg
atgatgcgtgaaacttaccctctgtcaatgtcattgctttctggcttgtctatcaatctt
tgtctgaaacttgctttccagcttgaagagaccatatttcttggccaggctgtccctagc
attgctatggtggaaacctatgtgagattactgcttatagcaccccattcattgttccgt
ccccattttacgacattaactcaaagatctccatctattttgagcaaatctggtgtgtct
ttgctcctacttgagatactgaattacagattgctgcctttgtataggtatcatggaaaa
agcaaggcgttgatgtatgatgtcacaaagataatatcaatgattaagggtaaacgtgga
gagcatcgtctttttagattagcagaaaatttgtgcatgaatttgattctctcactgaaa
gacttcttttttgtgaaaaaggagttgaagggtccgactgagtttactgaaactctaaac
cgcataacaataataagtcttgcgatcactatcaagacacgtggaattgctgaggttgaa
cacatgatttatcttcagccattgttagagcaaattatggcaaccagtcagcatacctgg
tcagaaaagacactacgatatttccctcctctcattcgtgattttttaatggggagaatg
gataagaggggtcaagctatccaagcatggcagcaggcagaaacaactgttattaaccag
tgtaatcagctgctctcaccatctgctgagccaaactatgtcatgacttatttgagccat
agtttccctcagcatcgtcaatatctttgcgctggtgcttggatgctgatgaatggacat
cttgagatcaacagtgcaaatcttgctcgtgtcttaagagagttttcacctgaggaagtt
acagcaaatatctataccatggttgatgtgcttttgcatcatatccaatttgaggtgcag
agacagcatctagcacaggacttactatccaaagcaatcacaaatctttctttctttata
tggacacatgaactccttccactggatattctattgctagctcttattgacagagatgat
gatccttatgctttacgccttgtgataagtctgctagaaaagccagaacttcagcaaaga
gtcaagaatttctgtaatactcgttctccagagcattggctgaaaaatcaacatccaaaa
agagctgagctccagaaagctcttggcagtcatctctcatggaaggaccgctatccaccc
ttcttcgatgacattgctgcacgcttgctccctgttatcccgctgattatttataggctt
attgagaatgatgcaacagacattgcagacagagttcttgcattttattcttccttgctt
gccttccacccgctaagatttacatttgtacgtgatattcttgcgtatttctatggtcat
cttccaatcaaactaattggtaggatcctcaacctgctgggtgttagcactaagaccccc
ttttcagaatcttttgctaagtatttagtgtcatcaaattcttcagtatgtccaccacca
gaatactttgccaacctgttgctaaacctggttaataatgttatacctcctttaagtagc
aaatccaaatcaaacccagcagacacaacacgctcgactttcaacaagcatcatgcatct
tcacaacctggtggagtcggtaacactgatggccagagggcattttatcagaatcaggat
cctgggtcgtatacgcagcttgttttggaaacagcagctattgagattctctcacttcct
gttcctgctgctcaaatagtgtcctctttggttcaaataatagcacatgtacaagcaatg
cttatacagtcaaatagtggccaaggaatgtcaggtggtttggggcaaagttctgggctg
ccaacgtctccttcaggagctgctgaatcctcaggtcccaaccaagcaaacagtgctgca
agtgggatcaatgccactaactttgtttctaggagtggctactcctgccaacaattgtct
gttttgatgattcaagcatgtggtcttttgctggcacaactcccaccagaattccacatg
caactatactcagaagcagctcgggtcataaaagattgctggtggcttgctgatagttcg
aggcctgttaaagagcttgactctgctgttggctatgcactgctggatcctacatgggct
tcccaagacaatacatcaacagccataggtaacattgtcgcccttctgcattcatttttt
agcaatcttccacaagaatggctggaatctacccatactgtcatcaaacacctccggcca
gtcaattcagttgccatgttaagaattgccttccgcatattgggtcccttgttacctcgt
ctagcctttgctcgacctttgttcatgaagaccttggctttactcttcaatgttttgggt
gatgtgtttggtaagaaccctccggtctcaaatccaaatcctgtggaggcgtcagaaatt
gcagacataattgacttcttgcatcacgcggtgatgtatgaaggccaagggggtcctgtt
cagagcacgagcaaacccaagttggagatactgacattatgcgggaaagtaatagaaatt
ttgaggccagacgtgcaacatcttctctcccacctgaagattgatcccgcctcttcaatc
tatgctgcaacgcatccaaagctcgttcaaagctcatcataa
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integrated database retrieval system
