Sorghum bicolor (sorghum): 8077689
Help
Entry
8077689 CDS
T01086
Name
(RefSeq) 3-ketoacyl-CoA synthase 5
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00062
Fatty acid elongation
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi04626
Plant-pathogen interaction
Module
sbi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
8077689
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8077689
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
8077689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
8077689
NCBI-ProteinID:
XP_021314109
LinkDB
All DBs
Position
4:complement(59620524..59622507)
Genome browser
AA seq
487 aa
AA seq
DB search
MSTMGSSAQLRRLKPLYQLVVNNILAIVAVPLAASVLLKAASLGPEEILARALALRPAHM
FLLAFLPAAATVLYLMLRPRAVYLVDYACFRTNPNCRVPFATFLEHSRVWPGFDERSVRF
MTRLLERSGLGEETCLPYAQHYIPPSRDLESSRAEAELVIFSAIDDLLAKTGVSPQDIDI
LVVNCSLFAPTPSFTDMIMHRYELRKDVRNVHLSGMGCSAGLISVELARNLLQVAPRGAR
ALVVSTETITPNYYMGRERAMLLPNCLFRMGGAAALLSTSGAGARFRLARVVRTLRGASD
SAYRCVYQEEDDRGNVGINLSKDLMNIAGDALKANITAMGPLVLPASEQLLFALSFIARK
VLNNRIKPYIPDFRTAFEHFCIHAGGRAVIDELQRSLTLSDEQVEASRMTLHRFGNTSSS
SLWYELAYIEAKGRMRTGDRVWMIGFGSGFKCNSAAWECIRPAANADGPWANCIHRYPVH
IPDVLKH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatgggctcctcggcgcagctcaggcggctgaagcctctgtaccagctggtg
gtgaacaacatcctggccatcgtggccgtgccgctcgccgcctcggtcctcctcaaggcg
gcgtcgctcgggcccgaggagatccttgcccgggccctggcgctccggccggcgcacatg
ttcctgctcgcgttcctgccggccgcggccacggtgctgtacctcatgctccgcccgcgc
gcggtgtacctggtggactacgcgtgcttccgcaccaaccccaactgccgcgtcccgttc
gcgacgttcctggagcactcccgcgtgtggccgggcttcgacgagcgcagcgtccggttc
atgacgcgcctcctggagcgctcgggtctcggggaggagacttgcctgccgtacgcgcag
cactacatcccgccgtcgcgtgacctcgagtcctcccgcgccgaggccgagctcgtcatc
ttctccgccatcgacgacctgctcgccaagacgggcgtctccccgcaggacatcgacatc
ctggtcgtgaactgcagcctgttcgcgccgacgccgtccttcacggacatgatcatgcac
cggtacgagctccgcaaggacgtgcgcaacgtgcacctctccgggatgggctgcagcgcg
ggtctcatctccgtggagctggcccggaacctgctgcaggtggctccccgtggcgcgcgc
gcgctggtggtgtcgacggagaccatcaccccgaactactacatgggcagggagcgcgcg
atgctgctcccaaactgcctgttccgcatgggcggcgcggcggcgctgctgtcgaccagc
ggcgccggggcgcggttccgcctggctcgcgtggtgcgcacgctgcggggcgcctcggac
agcgcgtaccgctgcgtgtaccaggaggaggacgaccgtggcaacgtgggcatcaacctg
tccaaggacctgatgaacatcgcgggcgacgcgctcaaggcgaacatcacggcgatgggc
ccgctggtgctgccggcgtcggagcagctgctgttcgcgctgtccttcatcgcgcgcaag
gtgctcaacaaccggatcaagccctacatcccggacttccgcacggcgttcgagcacttc
tgcatccacgcgggcgggcgcgcggtgatcgacgagctccagcggagcctcacgctgtcg
gacgagcaggtggaggcgtcgcggatgacgctgcaccgcttcggcaacacctccagcagc
tccctctggtacgagctcgcctacatcgaggccaagggacgcatgcgcaccggcgaccgc
gtctggatgatcggattcggctccgggttcaagtgcaacagcgccgcctgggagtgcatc
cgccccgccgccaacgccgacgggccatgggccaactgcatccaccggtacccagtccac
attcccgacgtgctcaagcactga
DBGET
integrated database retrieval system