Sorghum bicolor (sorghum): 8077752
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Entry
8077752 CDS
T01086
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8077752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8077752
Enzymes [BR:
sbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
8077752
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
90S particles
Other 90S particles
8077752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
8077752
NCBI-ProteinID:
XP_002451973
UniProt:
A0A921R4X2
C5Y0G8
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Position
4:16764214..16767813
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AA seq
285 aa
AA seq
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MGRPYGVKGRKKKRKLEEAATSDAAPPAEEVEELPPQEEAGGEEKGNEEDEAAAGEEEHA
AVDGIPIVPRTLDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADY
RPDIIHQALLAIFDSPLTKAGRLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQ
KLSITAVGKREKLLNVVKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSSDDEPLVFV
VGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNIQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccttacggggtgaagggacggaagaagaagcgcaagctcgaggaggcggcg
acctctgacgctgctccgcccgctgaagaggtggaggagctgccaccacaagaggaggcc
ggtggcgaggagaagggcaacgaggaggatgaggcagcggctggggaggaggagcacgct
gcggtggacgggatcccaatcgtacccagaacgcttgatgggaagcggcggcctggcgct
atcttcgtgctcgagagggcctgcctcgaggtcggcaaagtcggcaagactatgcaaatc
ttgaactcagatgatcatgcaaattatttgaggaagcagaatcgcaatcctgcagattat
aggcctgatataattcatcaggctctactagcaatatttgatagccctctgactaaggct
ggaaggttacaggctgtttatgtgaggactgaaaagggagtattgtttgaaatcaaacct
catgttcgcatgccaagaacgtttaaacgtttctgtggtttaatgtcacaattgttacaa
aaactgagcattacggcagttgggaagcgtgagaaacttcttaatgttgttaaaaatcct
gttacccgctatctacctgttggtgcacgaaagattggcctttcatttagtgctgagaag
tcagtcaacttgtttgactatgttgccaaatccagtgatgatgaaccccttgtgtttgtg
gttggtgccatggcccatggaaagatcgacaaggaatacacagatgattacatacaaatt
tgcaactaccctctcagtgccgcctgctgtttaaatcggatatgcagtgccctggagcaa
aagtggaacatccaatga
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