Sorghum bicolor (sorghum): 8077759
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Entry
8077759 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8077759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8077759
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8077759
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8077759
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
8077759
NCBI-ProteinID:
XP_002453731
UniProt:
A0A921R3Y8
C5Y0I4
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Position
4:complement(17426168..17432332)
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AA seq
344 aa
AA seq
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MELDSIECVSYSDGMEDDDDTAAVTSSQLPRPFLKSSSTAGTAAAAVNVVVVSDRTGAAG
PVAGAGPLVISPATGVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQE
LGDIRCLALEKVAESLELPCKYYSLGCPEVFPYYSKLKHESQCNFRPYNCPYAGSECSVV
GDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF
QLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGL
IIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDSGACIPNLFS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagctggacagcatcgagtgcgtgtcctactccgacggcatggaggatgacgacgac
accgccgccgtcacctcgtcccagctcccccgccccttcctcaaatcctcctccaccgcc
ggtaccgccgccgccgccgtcaacgtggtcgtcgtctccgaccgcactggtgccgccggg
ccggtagcgggggcggggccgctggtgatatcgccggccacgggcgtacacgagctgctc
gagtgccccgtctgcaccaactccatgtacccacccatccaccagtgccaaaatggtcat
actctgtgttcgacctgcaaaactcgggtgcacaaccgctgcccaacttgtcgacaagag
ctcggtgacatcaggtgtctggcattagaaaaagtggctgaatcacttgagctcccctgc
aaatactactctcttggatgtccagaagtctttccatactacagcaaactcaagcatgag
tcacagtgtaattttaggccatacaactgcccatatgctggttctgaatgctcagttgtt
ggggatattccttttcttgtggcacatctacgagatgatcataaagtggatatgcactct
ggatgtacatttaatcaccgctatgtcaagtccaacccaagagaggtcgaaaatgcaacc
tggatgctaactgtttttcattgttttgggcagtacttttgcttgcacttcgaggcattt
cagcttggaatggcaccagtgtacatggctttcctccggtttatgggtgatgaaaatgat
gctaggaactacagctatagcctagaggttggtgcaaatggcaggaagatgatatgggag
ggaactccccgcagcatcagggacagccaccggaaggttagggacagccatgatggccta
ataattcagcgcaacatggctctcttcttctcaggtggagataggaaagagctgaaactg
cgggtcacaggccgtatctggaaggagcagcagaatcctgattcaggagcctgcattccc
aatttgttcagctga
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