Sorghum bicolor (sorghum): 8077875
Help
Entry
8077875 CDS
T01086
Name
(RefSeq) pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00040
Pentose and glucuronate interconversions
sbi01100
Metabolic pathways
Module
sbi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8077875
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
8077875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
8077875
NCBI-ProteinID:
XP_002444448
UniProt:
C5YLR6
LinkDB
All DBs
Position
7:57595697..57601267
Genome browser
AA seq
584 aa
AA seq
DB search
MASTSTSTFPRATAPQLLLLVLSLLLAAASASSLLPPLNNAHPQRPSPVAKAREEEGGGG
SAGLISTLRETLDAIRDVASIISSFPISVGGGILGGGAGDLRLSSAVADCLDLLDLSSDE
LSWSMSTTTSSSDGYSPASAGAGAGAGGRVVGTGDDRSDLRSWLSGALGNQDTCKEGLDE
TGSPLASLVATGLDAVTSLLADGLGQVAAEEAVAAEEAVAASSASSRRGALGAAAPPPRW
VRARERRLLQMPVGPGGLAVDAVVAQDGSGNFTTVSAAVDAAPSQSAARHVIYVKKGVYR
ETVEVKKKKWNLMLVGDGMGVTVISGHRSYVDGYTTYRSATVAVSGKGFIARDLTFENTA
GPSKHQAVALRCDSDLSVFYRCGFEGYQDTLYAHSLRHFYRDCRVTGTVDFVFGNAAAVF
QNCSLLPRRPLPDQKNSVTAQGRLDANMTTGFAFQFCNVSAHPELLLNNATAAAAAAPPT
QTQTYLGRPWKQYSRVVFMQSYIGDLVRPEGWLAWDGDFALDTLYYGEYSNTGPGAGVAA
RVKWPGFHVMTSAAEAGNFTVAQFIEGNMWLPPTGVKYTAGLTS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgtcgacgtcgacgtttccgcgcgccacagcacctcagctcctcctcctc
gtgctctccctgctgctggccgctgccagcgcctcgtccctgcttcctcccctgaacaat
gcacacccgcagagaccttcgccggtggcgaaggcaagggaggaggagggcggcggcggc
tcggcggggctgatctcgacgctgcgcgagacgctggacgcgatcagggacgtggcgtcc
atcatctcgtcgttccccatcagcgtcggcggaggcatcctcgggggcggcgcaggcgac
ctccgcctgtcctccgccgtcgccgactgcctcgacctcctcgacctctcctccgacgag
ctgtcgtggtccatgtccacaaccacctcctcttcggacggctacagccccgccagcgcc
ggggcgggggcgggggcgggtggccgcgtcgtcggcaccggcgacgaccggtccgacctg
cggtcctggctgagcggcgcgctcgggaaccaggacacctgcaaggaaggcctggacgag
accggctccccgctggcctcgctcgtcgccacggggctcgacgccgtcacctcgctcctc
gccgacggcctcggccaggtcgcggccgaggaagcagtcgcggccgaggaagcagtcgcg
gcgtcgtcggcctcctctcgccgcggcgcgctcggcgccgccgccccgccgccacggtgg
gtgcgcgcgagggagcggcggctgctgcagatgcccgtggggcccgggggcctggcggtg
gacgccgtggtggcgcaggacgggagcggcaacttcacgacggtgagcgcggccgtggat
gcggcgccgtcgcagagcgcggcgcggcacgtgatctacgtgaagaagggcgtgtacagg
gagacggtggaggtgaagaagaagaagtggaacctgatgctggtcggcgacggcatgggc
gtcacggtcatctccggccaccgcagctacgtcgacggctacaccacctaccgcagcgcc
accgtcgctgtgagcggcaagggcttcatcgcgcgtgacctgacgttcgagaacacggcg
ggcccgtccaagcaccaggccgtggcgctgcggtgcgactcggacctctccgtcttctac
cgctgcggcttcgagggctaccaggacacgctgtacgcgcactcgctccgccacttctac
cgcgactgccgcgtcacgggcaccgtcgacttcgtcttcggcaacgccgccgccgtgttc
cagaactgctccctcctcccgcgccgcccgctccccgaccagaagaactccgtcaccgcg
cagggcaggctcgacgccaacatgaccaccggattcgccttccagttctgcaacgtctcc
gcccaccccgagctcctcctcaacaacgccaccgccgccgccgcggctgcgccgccgacg
cagacgcagacgtaccttggacggccgtggaagcagtactcgcgggtggtgttcatgcag
tcctacatcggcgacctggtgcgcccagaggggtggctcgcgtgggacggggacttcgcg
ctcgacacgctctactacggggagtacagcaacaccggccccggcgccggcgtcgccgcc
agggtcaagtggccagggttccacgtcatgaccagcgccgccgaggccggcaacttcacc
gtcgcgcagttcatcgagggcaacatgtggttgccgcccaccggcgtcaagtacaccgcc
ggcctcacgtcctga
DBGET
integrated database retrieval system
