Sorghum bicolor (sorghum): 8077969
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Entry
8077969 CDS
T01086
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 10 isoform X1
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8077969
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8077969
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8077969
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
90S particles
Helicases
8077969
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
8077969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
DUF2399
AAA_22
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
8077969
NCBI-ProteinID:
XP_002468616
UniProt:
C5X0W4
A0A921V4E9
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All DBs
Position
1:complement(79136553..79141563)
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AA seq
454 aa
AA seq
DB search
MANGDAAVEAGGNGKEEPAARQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQ
GKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAIQIAEQFEALGS
AIGLRCSVLVGGVDRVQQVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEAD
KLLNVEFEKSLDDILREIPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEAASKYSTVDS
LKQEFYFVPADDKDCYLLHVLNERQDSMIMIFVRTCESTRLLALMLRNLGLKAMSISGQM
SQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARA
GRSGYAVSLVNQYEAQWFVLIEKLLGKQIDQRKVDRDEVMILKGPISDAKRIALTKLKDS
GGHKKRRKAGDDDEEVEDYSHSKRPKSFKKSNRR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggggacgcggccgtggaggccggcgggaacgggaaggaggagcccgcggcg
cgccaggcttcgacgttcgcggagctgggtatctgcgcggagctcgtggaggcgtgcgac
gccatggggtggaaggagcccaccaggattcaggccgaggccatcccccacgcgctccaa
gggaaggacctgatcgcgctggcgcagacggggtccgggaagacgggcgcgttcgcgctg
cccatcctgcaggagctgctcagcaaccgccaggctgagcagtctttcttcgcttgcgtg
ctctcgccaacgagagagctggcgattcagatcgcggagcagtttgaggcgctcggatca
gctattggtttgcgttgctcagtgcttgttggaggagtggatcgggtgcaacaagtgtta
tccattggaaaacgtccgcacattgtggttggaactcctggccgtcttttggaccatttg
acagagactaaaggttttagtcttaagaaaatcaagtatttggtattggatgaagccgat
aagttacttaatgtggagtttgagaaatccctcgatgacattctgagagagatccctaaa
gacaggaggactttccttttttcagcgactatgaccaaaaaggtaaataaactgcaacgt
gcttgcctcaggaatcctgctaaggttgaagcggcctccaaatattctacagtagattca
cttaaacaggagttctattttgttcctgcagatgacaaggattgctatcttcttcatgtt
ctgaatgagaggcaagacagcatgatcatgatctttgtgcgcacatgtgaatctactagg
ctccttgctcttatgctgaggaatcttggtttgaaagctatgtctatcagtggccaaatg
agtcaggacaagagactaggtgctttgaacaggttcaaagcgaaagattgcaatatcctt
atttgcactgatgtagcaagtcgtggccttgacattcaaggagttgatatggtcatcaat
tatgatattccaatgaattctaaggattatgttcatcgggtgggtaggaccgcacgtgca
gggcggtcaggatatgctgtatctttggtgaatcaatatgaagcccagtggtttgtgctg
atcgagaagctccttggcaagcaaattgaccagcgtaaggtggacagagatgaagtcatg
atacttaaagggcccatatctgatgcaaagagaattgcacttacgaaattgaaggattcc
ggtggccacaagaagcgtagaaaggcgggagatgatgatgaagaggtggaggattattct
cattctaaaagaccgaaatccttcaagaaatcaaacagacgatga
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