Sorghum bicolor (sorghum): 8077973
Help
Entry
8077973 CDS
T01086
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
8077973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8077973
Membrane trafficking [BR:
sbi04131
]
SNARE
SNAP-25[C] (Qc)
STX8
8077973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
Ferritin
CC4_CEP85
SPEF2_D5
DUF2721
Ran-binding
DUF7809
Amnionless
Sec20
CCDC90-like
SPAM
DUF948
XhlA
Motif
Other DBs
NCBI-GeneID:
8077973
NCBI-ProteinID:
XP_002465967
UniProt:
C5X0X0
LinkDB
All DBs
Position
1:79192693..79194406
Genome browser
AA seq
251 aa
AA seq
DB search
MARPVLPITAPRGGAAPPSSWSSPVDQWTKRLQEAQRLVDEVAERVAERESVPPSLPREL
QRRTAEIRRKVAIVGTRLDMLKEDLSDLPKRQNISLKQLGKLAEKLAGVCSKAQEVGGQF
TMKYSSDRNDLCGWSAKIDVNSIANMDNHEMVKLQRKVMKEQDAELKILEETVTSTKHIA
LAINGELDLHTKLIEKLDEDVEETSNQLQRALKRLKALNTRMRKSRSCWGIVLSVVAVVI
CVAVFWALITI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtccagttcttccgatcacggccccgcgcggaggtgcagcgccgccgtcgtcg
tggtcttccccggtggaccagtggacgaagcggctccaggaggcccagcggctggtggac
gaggtcgccgagcgggtcgccgagagggagtccgtgccgccgtcgctgccgcgcgagctg
cagcgccggaccgccgagatccggcgcaaggtcgccatcgttggtaccaggctcgacatg
ctcaaggaggacctgtctgatctccccaaaagacaaaacataagcttgaaacagttgggc
aagctagccgagaagcttgccggtgtgtgttccaaggcgcaggaggttggcggccagttc
accatgaagtactcctcagacaggaatgacttgtgtggatggagcgcaaagatagatgta
aacagcattgccaacatggataaccatgaaatggtcaaattgcagaggaaggtaatgaaa
gagcaagatgctgagctgaagatactggaggagaccgttaccagcacgaagcacattgcg
ctagcgatcaacggggagctggacctacacactaagctcattgagaaactggacgaggat
gttgaagaaacaagcaaccagctgcagcgtgcgctgaagaggctgaaagcactcaacacg
cgcatgaggaaaagccgttcttgttggggcatcgtgttgtctgtcgttgccgttgtaatc
tgcgttgccgtattctgggctctgataacgatctag
DBGET
integrated database retrieval system
